RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 MS4A2Q01362 244 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 CREB5Q02930 508 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 CEACAM7Q14002 265 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 CYTH1Q15438 398 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 TCTN1Q2MV58 587 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 POM121L1PQ3SYA9 428 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 SLC22A9Q8IVM8 553 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 MFN1Q8IWA4 741 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 VCX3BQ9H321 246 aa17.05■□□□□ 0.32
EPB41L3-204ENST00000540638 PDCD11Q14690 1871 aaKnown RBP17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 H3BMM5 538 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 VPS26AO75436 327 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 TMCC1O94876 653 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 MAGEA11P43364 429 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 TLE2Q04725 743 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ZNF549Q6P9A3 640 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 LRRC43Q8N309 656 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ZNF296Q8WUU4 475 aaPredicted RBP17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 C19orf60Q96EN9 201 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 LINGO1Q96FE5 620 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ASIC4Q96FT7 647 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 MRPL9Q9BYD2 267 aaKnown RBP17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 C1orf21Q9H246 121 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 TLR9Q9NR96 1032 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ZNF840PA6NDX5 716 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 E7ENX8 843 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ATP5BP06576 529 aaKnown RBP17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ACRP10323 421 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 BMP1P13497 986 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 SLC7A2P52569 658 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 PRKAA2P54646 552 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 STX5Q13190 355 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ARMC12Q5T9G4 340 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 PIANPQ8IYJ0 282 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 DNAJB14Q8TBM8 379 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 ZBTB26Q9HCK0 441 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 RALGAPA2Q2PPJ7 1873 aa17.04■□□□□ 0.32
EPB41L3-204ENST00000540638 CLGNO14967 610 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 AKAP10O43572 662 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 STC2O76061 302 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 URODP06132 367 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 UGT1A6P19224 532 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 LPOP22079 712 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 UGT1A1P22309 533 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 UGT1A4P22310 534 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 CST5P28325 142 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 UGT1A3P35503 534 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 UGT1A5P35504 534 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 TSTA3Q13630 321 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 BEND5Q7L4P6 421 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 C3orf30Q96M34 536 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 PFDN6O15212 129 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 PGM3O95394 542 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 PYGLP06737 847 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 LHX8Q68G74 356 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 DNAJB7Q7Z6W7 309 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 DPF3Q92784 378 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 ISL2Q96A47 359 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 HGH1Q9BTY7 390 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 ADGRE3Q9BY15 652 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 CPQQ9Y646 472 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 KIF3CO14782 793 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 FFAR3O14843 346 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 GPR42O15529 346 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 CLDN11O75508 207 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 MT-ND1P03886 318 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 HOXD9P28356 352 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 GABRR2P28476 465 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 MAPKAPK2P49137 400 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 KPNA1P52294 538 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 SH3BP2P78314 561 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 FAM26DQ5JW98 314 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 RARS2Q5T160 578 aaKnown RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 SETD3Q86TU7 594 aaPredicted RBP17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 CNTN4Q8IWV2 1026 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 SCML4Q8N228 414 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 MDGA1Q8NFP4 955 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 TWIST2Q8WVJ9 160 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 MAGEH1Q9H213 219 aa17.03■□□□□ 0.32
EPB41L3-204ENST00000540638 CEP290O15078 2479 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 C1orf232A0A0U1RR37 186 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 UBFD1O14562 309 aaKnown RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 AZIN1O14977 448 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 ANKS6Q68DC2 871 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 OTOP2Q7RTS6 562 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 VPS33AQ96AX1 596 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 FEM1CQ96JP0 617 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 AKTIPQ9H8T0 292 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 SH3BP1Q9Y3L3 701 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 YIPF1Q9Y548 306 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 MYOCOSA0A1B0GUC4 107 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 ZNF839A8K0R7 811 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 HOXA2O43364 376 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 CACNG3O60359 315 aa17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 SNRPB2P08579 225 aaKnown RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 ZNF37AP17032 561 aaPredicted RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 PRDX3P30048 256 aaKnown RBP17.02■□□□□ 0.32
EPB41L3-204ENST00000540638 MTTPP55157 894 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms