RNA–Protein interactions for RNA: ENST00000540469.5

SFSWAP-209, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 3,536 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-209ENST00000540469 CD68P34810 354 aaPredicted RBP12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 DNAJB13P59910 316 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 MBTD1Q05BQ5 628 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 SLC13A2Q13183 592 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 SKIV2LQ15477 1246 aaKnown RBP12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 PCSK7Q16549 785 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 AGAP7PQ5VUJ5 663 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 PRR23BQ6ZRT6 265 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 TAS2R42Q7RTR8 314 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 ZNF280CQ8ND82 737 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 OR6P1Q8NGX9 317 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 STON2Q8WXE9 905 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 SLC30A3Q99726 388 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 ATP13A3Q9H7F0 1226 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 PLEKHA5Q9HAU0 1116 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 EXD2Q9NVH0 621 aa12.83□□□□□ -0.36
SFSWAP-209ENST00000540469 FAM72CH0Y354 149 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PSMB9P28065 219 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 HTR1BP28222 390 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NR4A2P43354 598 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NEK2P51955 445 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CHRNB3Q05901 458 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 GRB7Q14451 532 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 INAVAQ3KP66 663 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 FAM72AQ5TYM5 149 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TMEM236Q5W0B7 351 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TTC23Q5W5X9 447 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 FAM72DQ6L9T8 149 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NEPROQ6NW34 567 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 FAM72BQ86X60 149 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PLD3Q8IV08 490 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 MFSD6LQ8IWD5 586 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CLYBLQ8N0X4 340 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 MED10Q9BTT4 135 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 GDAP2Q9NXN4 497 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TRIM64A6NGJ6 449 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 H0YAE9 185 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NOBOXO60393 691 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NDUFS2O75306 463 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 INMTO95050 263 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CHEK2O96017 543 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 DPEP1P16444 411 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 GSTM2P28161 218 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 APLP1P51693 650 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 POU4F1Q01851 419 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 YWHAHQ04917 246 aaPredicted RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 DAG1Q14118 895 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PAFAH1B3Q15102 231 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TECRLQ5HYJ1 363 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 LARP4Q71RC2 724 aaKnown RBP eCLIP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 RALGPS2Q86X27 583 aaPredicted RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 SCML4Q8N228 414 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 MINDY1Q8N5J2 469 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 POC5Q8NA72 575 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CALML6Q8TD86 181 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 RORBQ92753 470 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TMBIM1Q969X1 311 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 NODALQ96S42 347 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TBL1YQ9BQ87 522 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 HGH1Q9BTY7 390 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 ANKMY1Q9P2S6 941 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 KLQ9UEF7 1012 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 ZFC3H1O60293 1989 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 LRRC37AA6NMS7 1700 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PEX10O60683 326 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 UGT2B4P06133 528 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 IQCF3P0C7M6 154 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 LBPP18428 481 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 ADARB1P78563 741 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PPP1R8Q12972 351 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 RBM48Q5RL73 367 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 RSBN1Q5VWQ0 802 aaPredicted RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 KIAA0408Q6ZU52 694 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 PAGE2Q7Z2X7 111 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CCDC103Q8IW40 242 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 OR52K2Q8NGK3 314 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TWIST2Q8WVJ9 160 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 BIRC7Q96CA5 298 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 CEP295NLQ96MC4 621 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 TOR3AQ9H497 397 aa12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 DDX28Q9NUL7 540 aaKnown RBP12.82□□□□□ -0.36
SFSWAP-209ENST00000540469 GSTA4O15217 222 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 NCAM2O15394 837 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 MSI1O43347 362 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 KPNA6O60684 536 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 SNX2O60749 519 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 JRKO75564 520 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 KRT8P05787 483 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 CRHBPP24387 322 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 MZF1P28698 734 aaPredicted RBP12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 BACE1P56817 501 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 YBX1P67809 324 aaKnown RBP12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 IRAK1BP1Q5VVH5 260 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 XAF1Q6GPH4 301 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 HEATR4Q86WZ0 1026 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 ITFG1Q8TB96 612 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 AFG1LQ8WV93 481 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 IL12RB2Q99665 862 aa12.81□□□□□ -0.36
SFSWAP-209ENST00000540469 CGREF1Q99674 301 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms