RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 TRIM16O95361 564 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 GNRH1P01148 92 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PTPN7P35236 360 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 OR2B6P58173 313 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TOR2AQ5JU69 321 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TBCELQ5QJ74 424 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 CCNJQ5T5M9 372 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM102BQ5T8I3 360 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 LIN9Q5TKA1 542 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TRMT10BQ6PF06 316 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 GDPD3Q7L5L3 318 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 CATSPER4Q7RTX7 472 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PAGE2Q7Z2X7 111 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 DGLUCYQ7Z3D6 616 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SPRED1Q7Z699 444 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 CDR2LQ86X02 465 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 CCDC185Q8N715 623 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM83FQ8NEG4 500 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 LRRC20Q8TCA0 184 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PPP1R13LQ8WUF5 828 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TRAPPC12Q8WVT3 735 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 GTF2H4Q92759 462 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SNAPC3Q92966 411 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 DACT3Q96B18 629 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 RNF170Q96K19 258 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 NT5C1BQ96P26 610 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 UNC93B1Q9H1C4 597 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 CCSER2Q9H7U1 834 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 AGPAT4Q9NRZ5 378 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TOPORSQ9NS56 1045 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ACTR3BQ9P1U1 418 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 NUDT5Q9UKK9 219 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 MGAMO43451 1857 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM25EA8MYX2 175 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PLK4O00444 970 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SEPT4O43236 478 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 TPST1O60507 370 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 DUSP11O75319 330 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SLITRK5O94991 958 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SNAP29O95721 258 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PGK1P00558 417 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 BMP1P13497 986 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 UQCRC1P31930 480 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 DDOSTP39656 456 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SERPINB9P50453 376 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SERPINH1P50454 418 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ATN1P54259 1190 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 LSM3P62310 102 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ADARB1P78563 741 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 RHAGQ02094 409 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 IGSF11Q5DX21 431 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ODR4Q5SWX8 454 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 LRRC8EQ6NSJ5 796 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM178BQ8IXR5 827 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 SLC22A15Q8IZD6 547 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ANKRD53Q8N9V6 530 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 OR13J1Q8NGT2 312 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 PROX1Q92786 737 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 MUL1Q969V5 352 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 AP5M1Q9H0R1 490 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 UPF3AQ9H1J1 476 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 ADNPQ9H2P0 1102 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 MRPL47Q9HD33 250 aaKnown RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 POLMQ9NP87 494 aaPredicted RBP9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 AURKCQ9UQB9 309 aa9.47□□□□□ -0.89
CTNNA1-243ENST00000540387 MYADML2A6NDP7 307 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 SAGE2PA6NJ88 616 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 OR5K4A6NMS3 321 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 ZBBXA8MT70 800 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 KCNU1A8MYU2 1149 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 ZBTB42B2RXF5 422 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 TISP43B9A030 160 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 GABARAPO95166 117 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 HMGCRP04035 888 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 INSRRP14616 1297 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 IL12AP29459 219 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 AXLP30530 894 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 NDST1P52848 882 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 KCNJ11Q14654 390 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 ACAP2Q15057 778 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 NAPRTQ6XQN6 538 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 R3HCC1LQ7Z5L2 792 aaKnown RBP9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 DHFR2Q86XF0 187 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 UBQLNLQ8IYU4 475 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 METTL4Q8N3J2 472 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 SVOPQ8N4V2 548 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 DYNC2LI1Q8TCX1 351 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 URGCPQ8TCY9 931 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 TMC2Q8TDI7 906 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 TMEM143Q96AN5 459 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 REXO5Q96IC2 774 aaKnown RBP9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 FAM167AQ96KS9 214 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 MUS81Q96NY9 551 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 CCM2LQ9NUG4 571 aaPredicted RBP9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 SYBUQ9NX95 663 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 Q9Y3F1 56 aa9.46□□□□□ -0.89
CTNNA1-243ENST00000540387 LEUTXA8MZ59 168 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 TPP1O14773 563 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms