RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 POLD2P49005 469 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 BLKP51451 505 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 EIF3EP60228 445 aaKnown RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 GUSBP11Q6P575 273 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 CCNI2Q6ZMN8 369 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 SFTPA2Q8IWL1 248 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 SLC35F3Q8IY50 421 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 RNF10Q8N5U6 811 aaKnown RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 UBL4BQ8N7F7 174 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 CCDC112Q8NEF3 446 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 MRGPRX2Q96LB1 330 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 FCRL5Q96RD9 977 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 RIOK2Q9BVS4 552 aaKnown RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 BOCQ9BWV1 1114 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 FRMD8Q9BZ67 464 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 TMEM168Q9H0V1 697 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 SUDS3Q9H7L9 328 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 GRPEL1Q9HAV7 217 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 CYP4F12Q9HCS2 524 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 PHPT1Q9NRX4 125 aaPredicted RBP15.02□□□□□ -0.01
UBE3B-212ENST00000540230 KCTD5Q9NXV2 234 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 FAM153AQ9UHL3 310 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 MOSPD1Q9UJG1 213 aa15.02□□□□□ -0.01
UBE3B-212ENST00000540230 IGF2RP11717 2491 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 COL27A1Q8IZC6 1860 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-212ENST00000540230 LAMA5O15230 3695 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 AURKAO14965 403 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 TJP3O95049 919 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 NDST3O95803 873 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 TNFP01375 233 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 SLC4A1P02730 911 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 ANXA6P08133 673 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 CTSEP14091 401 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 TEAD1P28347 426 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 SPINT3P49223 89 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 WNT3AP56704 352 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 KLF1Q13351 362 aaPredicted RBP15.01□□□□□ -0.01
UBE3B-212ENST00000540230 C6orf132Q5T0Z8 1188 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 HES3Q5TGS1 186 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 ZNF765Q7L2R6 523 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 ATL2Q8NHH9 583 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 VAT1Q99536 393 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 TSGA10Q9BZW7 698 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 DNPEPQ9ULA0 475 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 R3HDM2Q9Y2K5 976 aaKnown RBP15.01□□□□□ -0.01
UBE3B-212ENST00000540230 ZNF711Q9Y462 761 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 RP1P56715 2156 aa15.01□□□□□ -0.01
UBE3B-212ENST00000540230 ARHGEF17Q96PE2 2063 aaPredicted RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 LOC285095A0A1B0GVY8 99 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 FADS2P1A8MWK0 482 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 TNFRSF10CO14798 259 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 INPP4BO15327 924 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 KCNN4O15554 427 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 KRT86O43790 486 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 KELP23276 732 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 INSM1Q01101 510 aaPredicted RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 OLIG2Q13516 323 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 ELOCQ15369 112 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 HENMT1Q5T8I9 393 aaKnown RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 DOK6Q6PKX4 331 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 ADAMTSL4Q6UY14 1074 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 CDKL3Q8IVW4 592 aaPredicted RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 NRSN1Q8IZ57 195 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 FSTL5Q8N475 847 aaPredicted RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 IPMKQ8NFU5 416 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 GBA3Q9H227 469 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 CARS2Q9HA77 564 aaKnown RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 ZFYVE1Q9HBF4 777 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 USP29Q9HBJ7 922 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 LZTFL1Q9NQ48 299 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 SIRPGQ9P1W8 387 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 RSPH14Q9UHP6 348 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 TMEM98Q9Y2Y6 226 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 PCYT1BQ9Y5K3 369 aaPredicted RBP15□□□□□ -0.01
UBE3B-212ENST00000540230 ST14Q9Y5Y6 855 aa15□□□□□ -0.01
UBE3B-212ENST00000540230 BPTFQ12830 3046 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 DMXL2Q8TDJ6 3036 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 KNTC1P50748 2209 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 PSMB4P28070 264 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 CETN2P41208 172 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 ILKQ13418 452 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 CAMK2BQ13554 666 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 SIRPB2Q5JXA9 342 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 ANKRD20A2Q5SQ80 823 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 PERM1Q5SV97 790 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 ANKRD20A1Q5TYW2 823 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 ANKRD20A3Q5VUR7 823 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 DARS2Q6PI48 645 aaKnown RBP14.99□□□□□ -0.01
UBE3B-212ENST00000540230 TMC3Q7Z5M5 1100 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 NLRP8Q86W28 1048 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 GALNT15Q8N3T1 639 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 SLC25A41Q8N5S1 370 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 KYQ8NBH2 561 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 GPR26Q8NDV2 337 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 CCDC110Q8TBZ0 833 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 IFI44Q8TCB0 444 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 COX14Q96I36 57 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 MAGEE1Q9HCI5 957 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 PKD2L2Q9NZM6 624 aa14.99□□□□□ -0.01
UBE3B-212ENST00000540230 TRHDEQ9UKU6 1024 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms