RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 DDIASQ8IXT1 998 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 OR4L1Q8NH43 312 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 ZNF296Q8WUU4 475 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 LRTOMTQ8WZ04 291 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 RMDN1Q96DB5 314 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 CCDC126Q96EE4 140 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 C19orf60Q96EN9 201 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PDFQ9HBH1 243 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 BPIFA1Q9NP55 256 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 SEMA4BQ9NPR2 832 aaPredicted RBP11.5□□□□□ -0.57
C11orf54-214ENST00000540113 CATSPERZQ9NTU4 200 aa11.5□□□□□ -0.57
C11orf54-214ENST00000540113 PRSS51A0A1B0GVH4 220 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 NR5A2O00482 541 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 PIP5K1BO14986 540 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 PEX1O43933 1283 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 RPP40O75818 363 aaKnown RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SNRPB2P08579 225 aaKnown RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 MTHFD2P13995 350 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 CHRM3P20309 590 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 HERVK_113P63132 956 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SATB1Q01826 763 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 CNPY1Q3B7I2 92 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 PARP15Q460N3 678 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 RARS2Q5T160 578 aaKnown RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 IYDQ6PHW0 289 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 C16orf59Q7L2K0 433 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 NPAS4Q8IUM7 802 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 DENND1CQ8IV53 801 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SLC22A9Q8IVM8 553 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 ST13P4Q8IZP2 240 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 DCBLD1Q8N8Z6 715 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 MDGA1Q8NFP4 955 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 OR4K2Q8NGD2 314 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SLC30A3Q99726 388 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 ERVK-6Q9BXR3 956 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 HMX1Q9NP08 348 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 GKN1Q9NS71 199 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 TIMM22Q9Y584 194 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 PCDHGC4Q9Y5F7 938 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 AP4B1Q9Y6B7 739 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 A0A1B0GTW7 788 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SUPT3HB4E1H0 165 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 F5H5T6 163 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 CDC7O00311 574 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SUPT3HO75486 399 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 IRF1P10914 325 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 BMP1P13497 986 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 GFAPP14136 432 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 ZNF37AP17032 561 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 NELFEP18615 380 aaKnown RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 HOXD9P28356 352 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 MAPKAPK2P49137 400 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 CHN2P52757 468 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 RFTN1Q14699 578 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 VPS26BQ4G0F5 336 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SETMARQ53H47 684 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 SLC30A9Q6PML9 568 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 AMIGO2Q86SJ2 522 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 AFAP1L2Q8N4X5 818 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 TMEM102Q8N9M5 508 aaPredicted RBP11.49□□□□□ -0.57
C11orf54-214ENST00000540113 L3HYPDHQ96EM0 354 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 CDKN2AIPNLQ96HQ2 116 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 TTLL2Q9BWV7 592 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 TUBB1Q9H4B7 451 aa11.49□□□□□ -0.57
C11orf54-214ENST00000540113 TBKBP1A7MCY6 615 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 OR1I1O60431 355 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 NRP2O60462 931 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 RHOBTB1O94844 696 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 FESP07332 822 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 SERPINF2P08697 491 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 PRDX3P30048 256 aaKnown RBP11.48□□□□□ -0.57
C11orf54-214ENST00000540113 AGTR2P50052 363 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 SLC7A2P52569 658 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 XIAPP98170 497 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 STX5Q13190 355 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TRIM25Q14258 630 aaKnown RBP11.48□□□□□ -0.57
C11orf54-214ENST00000540113 CAPRIN1Q14444 709 aaKnown RBP11.48□□□□□ -0.57
C11orf54-214ENST00000540113 ARMC3Q5W041 872 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 MRNIPQ6NTE8 343 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 LINGO4Q6UY18 593 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 GABPB2Q8TAK5 448 aaPredicted RBP11.48□□□□□ -0.57
C11orf54-214ENST00000540113 BRSK1Q8TDC3 778 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TWIST2Q8WVJ9 160 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 WBP2Q969T9 261 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 SLCO4A1Q96BD0 722 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 FEM1CQ96JP0 617 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 FAR2Q96K12 515 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TRAPPC9Q96Q05 1148 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 VN1R3Q9BXE9 311 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 NACA2Q9H009 215 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 UNC93B1Q9H1C4 597 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 LRFN2Q9ULH4 789 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 LAMA3Q16787 3333 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TANC1Q9C0D5 1861 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 CBX4O00257 560 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 TRIM24O15164 1050 aa11.48□□□□□ -0.57
C11orf54-214ENST00000540113 CLASP2O75122 1294 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms