RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 HADHAP40939 763 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ETV3P41162 512 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ARCN1P48444 511 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ACOX1Q15067 660 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TECPR1Q7Z6L1 1165 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FBF1Q8TES7 1133 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RLN3Q8WXF3 142 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 NELL1Q92832 810 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CERS2Q96G23 380 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 C19orf43Q9BQ61 176 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PKD2L2Q9NZM6 624 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FNDC3AQ9Y2H6 1198 aaKnown RBP18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MYLKQ15746 1914 aa18.87■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3DA0A087WVF3 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3IA0A087WXS9 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3EA0A087X179 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3KA0A087X1G2 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CCDC162PA2VCL2 907 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3FA6NER0 549 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 IGLON5A6NGN9 336 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 OR51F1A6NGY5 319 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FAM47DPA6NHR8 397 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3LB9A6J9 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GOLGA8KD6RF30 607 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GOLGA8TH3BQL2 631 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 H7C0S8 307 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZNF217O75362 1048 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RECQL5O94762 991 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 C1QAP02745 245 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3HP0C7X1 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PRAMEP78395 509 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 XIAPP98170 497 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PEX6Q13608 980 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FRG1Q14331 258 aaKnown RBP18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 LONRF1Q17RB8 773 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SEL1L3Q68CR1 1132 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3GQ6DHY5 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3CQ6IPX1 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TBC1D3Q8IZP1 549 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FRMD1Q8N878 549 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ANKRD7Q92527 254 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FUT8Q9BYC5 575 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 KDM4CQ9H3R0 1056 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SGK2Q9HBY8 427 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PREBQ9HCU5 417 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 IL26Q9NPH9 171 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 C20orf96Q9NUD7 363 aaPredicted RBP18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CD84Q9UIB8 345 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SPAG17Q6Q759 2223 aa18.86■□□□□ 0.61
TNFRSF1A-213ENST00000540022 IGHV1OR15-9A0A0B4J2B8 117 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GAPDHSO14556 408 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 LZTS3O60299 673 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RNGTTO60942 597 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PIAS1O75925 651 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ABHD2P08910 425 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ERVK-10P10266 1014 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PHBP35232 272 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FNTBP49356 437 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CREB5Q02930 508 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MAP7D1Q3KQU3 841 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SPDYCQ5MJ68 293 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ALS2CLQ60I27 953 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZC3H14Q6PJT7 736 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CYS1Q717R9 158 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 OR6P1Q8NGX9 317 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SCAMP4Q969E2 229 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TOE1Q96GM8 510 aaKnown RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SMYD2Q9NRG4 433 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 WSB2Q9NYS7 404 aaPredicted RBP18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 INVSQ9Y283 1065 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 EML5Q05BV3 1969 aa18.85■□□□□ 0.61
TNFRSF1A-213ENST00000540022 A0A087WUV0 522 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 A0A1W2PQU0 124 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 WNT9AO14904 365 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 AXIN1O15169 862 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TM7SF2O76062 418 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GOT2P00505 430 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MC4RP32245 332 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SPAM1P38567 509 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PPP2CBP62714 309 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PPP2CAP67775 309 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 TMEM259Q4ZIN3 620 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PDPK2PQ6A1A2 396 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 KIAA1161Q6NSJ0 714 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 NEK5Q6P3R8 708 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FAM151BQ6UXP7 276 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PTAR1Q7Z6K3 402 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 KCNMB4Q86W47 210 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RAVER1Q8IY67 606 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FAM160A2Q8N612 972 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZBTB44Q8NCP5 570 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 OR2T34Q8NGX1 318 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 DTD2Q96FN9 168 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ABCG8Q9H221 673 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RABGEF1Q9UJ41 708 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZNF292O60281 2723 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 GLYATL1P3A0A0U1RQE8 302 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RGSL1A5PLK6 1076 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 LRRC72A6NJI9 287 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SEMA4FO95754 770 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms