RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 REXO2Q9Y3B8 237 aaKnown RBP14.96□□□□□ -0.01
USB1-203ENST00000539737 SPTAN1Q13813 2472 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 USP9XQ93008 2570 aaPredicted RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 J3KR12 359 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 NVLO15381 856 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 SUOXP51687 545 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 ARSEP51690 589 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 B4GALNT1Q00973 533 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 ELP6Q0PNE2 266 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 RALGDSQ12967 914 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 EIF3IQ13347 325 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 DPYSL3Q14195 570 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 ODF2Q5BJF6 829 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 AFMIDQ63HM1 303 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 VSIG1Q86XK7 387 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 RHOT1Q8IXI2 618 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 NPWQ8N729 165 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 SCG3Q8WXD2 468 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 CELF6Q96J87 481 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 DPEP2Q9H4A9 486 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 CYP4F12Q9HCS2 524 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 SPATS2LQ9NUQ6 558 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 DDX56Q9NY93 547 aaKnown RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 ANKMY1Q9P2S6 941 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 ACSL6Q9UKU0 697 aa14.95□□□□□ -0.02
USB1-203ENST00000539737 USP9YO00507 2555 aaPredicted RBP14.95□□□□□ -0.02
USB1-203ENST00000539737 A0A0U1RQS6 177 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 LRRD1A4D1F6 860 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ZNF487B1APH4 448 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 DFFAO00273 331 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 RIOK3O14730 519 aaKnown RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 PJA2O43164 708 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 PSTPIP1O43586 416 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 TNFP01375 233 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 FUCA1P04066 466 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 KRT1P04264 644 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ITGB2P05107 769 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 LIFP15018 202 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 COMTP21964 271 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 AK4P27144 223 aaPredicted RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 MMP12P39900 470 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 BLKP51451 505 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 NAP1L1P55209 391 aaKnown RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 KIF5AQ12840 1032 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 HLTFQ14527 1009 aaKnown RBP eCLIP14.94□□□□□ -0.02
USB1-203ENST00000539737 IFI16Q16666 785 aaKnown RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 UGP2Q16851 508 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 C14orf28Q4W4Y0 310 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ERAP2Q6P179 960 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ZNF761Q86XN6 746 aaPredicted RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 ARHGAP12Q8IWW6 846 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ANP32BQ92688 251 aaKnown RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 FAF2Q96CS3 445 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 CCDC74BQ96LY2 380 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 DESI2Q9BSY9 194 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 SLC12A9Q9BXP2 914 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 SP110Q9HB58 689 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ZNF71Q9NQZ8 489 aaPredicted RBP14.94□□□□□ -0.02
USB1-203ENST00000539737 TFR2Q9UP52 801 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 MFHAS1Q9Y4C4 1052 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 PLEKHM1Q9Y4G2 1056 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 ST14Q9Y5Y6 855 aa14.94□□□□□ -0.02
USB1-203ENST00000539737 RCCD1A6NED2 376 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 TOR1BO14657 336 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 DUX1O43812 170 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 PRAMEF11O60813 436 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 RECQL5O94762 991 aaPredicted RBP14.93□□□□□ -0.02
USB1-203ENST00000539737 CD48P09326 243 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 FGF3P11487 239 aaPredicted RBP14.93□□□□□ -0.02
USB1-203ENST00000539737 GLB1P16278 677 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 AMPD1P23109 780 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 HTR1BP28222 390 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 ALDH4A1P30038 563 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 PEX5P50542 639 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 PAPOLAP51003 745 aaKnown RBP14.93□□□□□ -0.02
USB1-203ENST00000539737 ARHGEF7Q14155 803 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 OGFOD3Q6PK18 319 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 LVRNQ6Q4G3 990 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 ARHGAP36Q6ZRI8 547 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 DAAM2Q86T65 1068 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 NRROSQ86YC3 692 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 OR56A4Q8NGH8 313 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 TSGA10Q9BZW7 698 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 SLC39A8Q9C0K1 460 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 SUV39H2Q9H5I1 410 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 PDFQ9HBH1 243 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 SEPT10Q9P0V9 454 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 DKK3Q9UBP4 350 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 ATP8A1Q9Y2Q0 1164 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.93□□□□□ -0.02
USB1-203ENST00000539737 ALG6Q9Y672 507 aa14.93□□□□□ -0.02
USB1-203ENST00000539737 TSPAN11A1L157 253 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 PPFIA2O75334 1257 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 PALMO75781 387 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 KDELR1P24390 212 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 IL4RP24394 825 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 CSF2RBP32927 897 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 POLD2P49005 469 aa14.92□□□□□ -0.02
USB1-203ENST00000539737 MMRN1Q13201 1228 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms