RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 DUSP4Q13115 394 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 SERINC3Q13530 473 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 RFTN1Q14699 578 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 MSANTD2Q6P1R3 559 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 ZFP1Q6P2D0 407 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 KLHDC10Q6PID8 442 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 GLB1LQ6UWU2 654 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 ERVK-6Q9BXR3 956 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 NMRK2Q9NPI5 230 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.04□□□□□ -0.16
UBE3B-210ENST00000539599 PCDHGC4Q9Y5F7 938 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 UNC80Q8N2C7 3258 aa14.04□□□□□ -0.16
UBE3B-210ENST00000539599 LOC285095A0A1B0GVY8 99 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 ARHGAP10A1A4S6 786 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 NPEPPSL1A6NEC2 478 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 H3BSA7 217 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 AKAP10O43572 662 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 CLASP2O75122 1294 aaKnown RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 FDXRP22570 491 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 KPNA2P52292 529 aaKnown RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 NDST2P52849 883 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 STX5Q13190 355 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 RABL3Q5HYI8 236 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 LINGO4Q6UY18 593 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 TAS1R1Q7RTX1 841 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 LCA5Q86VQ0 697 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 APLFQ8IW19 511 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 COLGALT2Q8IYK4 626 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 ADCY4Q8NFM4 1077 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 OR4K2Q8NGD2 314 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 DNAJB14Q8TBM8 379 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 RMDN1Q96DB5 314 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 C1orf74Q96LT6 269 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 RANBP9Q96S59 729 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 SOX17Q9H6I2 414 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 SARS2Q9NP81 518 aaKnown RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 EPS15L1Q9UBC2 864 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 CD300AQ9UGN4 299 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 EVLQ9UI08 416 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 SLC22A2O15244 555 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 KPNA6O60684 536 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 HGFP14210 728 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 HK2P52789 917 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 FKBP1BP68106 108 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 IKBKEQ14164 716 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 C16orf59Q7L2K0 433 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 CCDC117Q8IWD4 279 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-210ENST00000539599 PIANPQ8IYJ0 282 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 EFHBQ8N7U6 833 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 MDGA1Q8NFP4 955 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 TSPAN17Q96FV3 270 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 TMEM74Q96NL1 305 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 CAAP1Q9H8G2 361 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 POLG2Q9UHN1 485 aa14.03□□□□□ -0.16
UBE3B-210ENST00000539599 WASH4PA8MWX3 477 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 KIF3CO14782 793 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 NIPSNAP2O75323 286 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 RHOBTB1O94844 696 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SEC24DO94855 1032 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-210ENST00000539599 GJB5O95377 273 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 PIM1P11309 404 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-210ENST00000539599 TYMPP19971 482 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SATB1Q01826 763 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 RHDQ02161 417 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SLC14A2Q15849 920 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 PRSS55Q6UWB4 352 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-210ENST00000539599 BEND5Q7L4P6 421 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 OR4L1Q8NH43 312 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SOCS4Q8WXH5 440 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 BTN2A3PQ96KV6 586 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 GPR21Q99679 349 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SPC25Q9HBM1 224 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 CATSPERZQ9NTU4 200 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 TMEM181Q9P2C4 612 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 SUCOQ9UBS9 1254 aaKnown RBP14.02□□□□□ -0.16
UBE3B-210ENST00000539599 RAB26Q9ULW5 256 aa14.02□□□□□ -0.16
UBE3B-210ENST00000539599 ADAM12O43184 909 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 TLR5O60602 858 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 ZNF189O75820 626 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-210ENST00000539599 BAIAP3O94812 1187 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 FAM58BPP0C7Q3 252 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 ADSLP30566 484 aaPredicted RBP14.02□□□□□ -0.17
UBE3B-210ENST00000539599 POLD2P49005 469 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 INHBCP55103 352 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 PSAPL1Q6NUJ1 521 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 TEX26Q8N6G2 289 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 SIDT2Q8NBJ9 832 aaKnown RBP14.02□□□□□ -0.17
UBE3B-210ENST00000539599 WBP2Q969T9 261 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 CDKN2AIPNLQ96HQ2 116 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 ATOH8Q96SQ7 321 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 TMEM79Q9BSE2 394 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 TRIM62Q9BVG3 475 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 POLR1EQ9GZS1 481 aaKnown RBP14.02□□□□□ -0.17
UBE3B-210ENST00000539599 GKN1Q9NS71 199 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 CMTM6Q9NX76 183 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 ZNF225Q9UK10 706 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 PCDHB5Q9Y5E4 795 aa14.02□□□□□ -0.17
UBE3B-210ENST00000539599 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
UBE3B-210ENST00000539599 FXYD1O00168 92 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms