RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SLC25A51Q9H1U9 297 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ARNT2Q9HBZ2 717 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PRDM5Q9NQX1 630 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 GABRQQ9UN88 632 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 CORINQ9Y5Q5 1042 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DGKBQ9Y6T7 804 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 C1orf232A0A0U1RR37 186 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 NPHS1O60500 1241 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 SUPT7LO94864 414 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 LEPRP48357 1165 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ESRRGP62508 458 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 CAP1Q01518 475 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 TSPY1Q01534 308 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PFKPQ01813 784 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ITGADQ13349 1161 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 MS4A13Q5J8X5 152 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 C6orf10Q5SRN2 563 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 SETD3Q86TU7 594 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 RETREG3Q86VR2 466 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 UBXN10Q96LJ8 280 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PCDH12Q9NPG4 1184 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PNPLA3Q9NST1 481 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 TRNAU1APQ9NX07 287 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 NCKIPSDQ9NZQ3 722 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 SH3GLB1Q9Y371 365 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 K7EPI3 171 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ASGR1P07306 291 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PCNAP12004 261 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ATP5F1P24539 256 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DNAJB1P25685 340 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 POLD2P49005 469 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 HK2P52789 917 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DNAJB13P59910 316 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 TIAL1Q01085 375 aaKnown RBP eCLIP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PSMD5Q16401 504 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 FAM83EQ2M2I3 478 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 TIGD7Q6NT04 549 aaPredicted RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 ZC3H7AQ8IWR0 971 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 THEM5Q8N1Q8 247 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 DCBLD1Q8N8Z6 715 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 BPIFB6Q8NFQ5 453 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 PABPC5Q96DU9 382 aaKnown RBP12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 KCNA7Q96RP8 456 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 OSBPL11Q9BXB4 747 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 RRAGCQ9HB90 399 aa12.55□□□□□ -0.4
SFSWAP-208ENST00000539506 A0A087X1B8 175 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 WASH4PA8MWX3 477 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 INPP4BO15327 924 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ADAMTS4O75173 837 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ALDH3B2P48448 385 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ITKQ08881 620 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 LRP8Q14114 963 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 CARTPTQ16568 116 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 NHSL2Q5HYW2 709 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 NANOGP8Q6NSW7 305 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 DNAJC14Q6Y2X3 702 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 CILP2Q8IUL8 1156 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 UMODL1-AS1Q8N2C9 162 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 BBS5Q8N3I7 341 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 C1orf74Q96LT6 269 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 GMIPQ9P107 970 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 VPS28Q9UK41 221 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 CROTQ9UKG9 612 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 BTRCQ9Y297 605 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 MYO16Q9Y6X6 1858 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 TRIM43BA6NCK2 446 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 MROH6A6NGR9 719 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 SLCO1B7G3V0H7 640 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 TOR1BO14657 336 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 EI24O14681 340 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 MUSKO15146 869 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 SIX3O95343 332 aaPredicted RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 FUCA1P04066 466 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ELK4P28324 431 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 SERPINH1P50454 418 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC12A2P55011 1212 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 CRHR2Q13324 411 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 MAPRE1Q15691 268 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 KCNA10Q16322 511 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 HECTD2Q5U5R9 776 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 PIWIL4Q7Z3Z4 852 aaKnown RBP12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 IFNL1Q8IU54 200 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 EPHX4Q8IUS5 362 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ARRDC2Q8TBH0 407 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 HDAC10Q969S8 669 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 PLGRKTQ9HBL7 147 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 TBC1D13Q9NVG8 400 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 PLK2Q9NYY3 685 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 TLR6Q9Y2C9 796 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 ACTL7AQ9Y615 435 aa12.54□□□□□ -0.4
SFSWAP-208ENST00000539506 H3BMM5 538 aa12.53□□□□□ -0.4
SFSWAP-208ENST00000539506 SLC22A2O15244 555 aa12.53□□□□□ -0.4
SFSWAP-208ENST00000539506 IPO13O94829 963 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms