RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 ACTRT1Q8TDG2 376 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 SETD7Q8WTS6 366 aaKnown RBP15.7■□□□□ 0.1
RPAIN-206ENST00000539417 OR1E3Q8WZA6 343 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PDXPQ96GD0 296 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 TEX101Q9BY14 249 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 GPR63Q9BZJ6 419 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 FGF22Q9HCT0 170 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PCOLCE2Q9UKZ9 415 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 CNOT6Q9ULM6 557 aaKnown RBP15.7■□□□□ 0.1
RPAIN-206ENST00000539417 ZKSCAN5Q9Y2L8 839 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PCDHGB2Q9Y5G2 931 aa15.7■□□□□ 0.1
RPAIN-206ENST00000539417 PGRMC1O00264 195 aaKnown RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 INPP4BO15327 924 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 PIAS2O75928 621 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 FGF1P05230 155 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 NME1P15531 152 aaKnown RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 BPIP17213 487 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 TPH1P17752 444 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 POLD2P49005 469 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 ARRB1P49407 418 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 CDK3Q00526 305 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 C1orf61Q13536 156 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 TRIP13Q15645 432 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 HENMT1Q5T8I9 393 aaKnown RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 CCDC70Q6NSX1 233 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 PSAPL1Q6NUJ1 521 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 NRSN1Q8IZ57 195 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 MAIP1Q8WWC4 291 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 CAPZA3Q96KX2 299 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 NAPGQ99747 312 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 WDR26Q9H7D7 661 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 PCYT1BQ9Y5K3 369 aaPredicted RBP15.69■□□□□ 0.1
RPAIN-206ENST00000539417 ARL5AQ9Y689 179 aa15.69■□□□□ 0.1
RPAIN-206ENST00000539417 SPAARA0A1B0GVQ0 90 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 GPR39O43194 453 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 DFNA5O60443 496 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 KCNK5O95279 499 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 TSHRP16473 764 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 JUNDP17535 347 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 KCNA4P22459 653 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 MSNP26038 577 aaKnown RBP15.68■□□□□ 0.1
RPAIN-206ENST00000539417 GPR1P46091 355 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 KIAA1024LP59773 190 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 CYP1B1Q16678 543 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 ZNF648Q5T619 568 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-206ENST00000539417 ZNF765Q7L2R6 523 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 RD3Q7Z3Z2 195 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 CREG2Q8IUH2 290 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 PHACTR4Q8IZ21 702 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 OXR1Q8N573 874 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 EID2Q8N6I1 236 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 BAHD1Q8TBE0 780 aaPredicted RBP15.68■□□□□ 0.1
RPAIN-206ENST00000539417 CCHCR1Q8TD31 782 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 MAGOHBQ96A72 148 aaKnown RBP15.68■□□□□ 0.1
RPAIN-206ENST00000539417 WDR92Q96MX6 357 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 FAM83DQ9H4H8 585 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 ARFGAP3Q9NP61 516 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 RAB6BQ9NRW1 208 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 PKD2L2Q9NZM6 624 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 IL17CQ9P0M4 197 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 TMPRSS11EQ9UL52 423 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 TMEM98Q9Y2Y6 226 aa15.68■□□□□ 0.1
RPAIN-206ENST00000539417 OAS3Q9Y6K5 1087 aaKnown RBP15.68■□□□□ 0.1
RPAIN-206ENST00000539417 PDE2AO00408 941 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 TRIM38O00635 465 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CES2O00748 559 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 GAPDHSO14556 408 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 TOR1BO14657 336 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 FFAR2O15552 330 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 AP2A1O95782 977 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CEACAM5P06731 702 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 MYF5P13349 255 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CSRP1P21291 193 aaKnown RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 SDHBP21912 280 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 COILP38432 576 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 NOVA1P51513 510 aaKnown RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 TERF1P54274 439 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 SRP54P61011 504 aaKnown RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 PTK2BQ14289 1009 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 GLT6D1Q7Z4J2 308 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 HID1Q8IV36 788 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CCDC89Q8N998 374 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 ZNF548Q8NEK5 533 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 OR56A4Q8NGH8 313 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 OR52K1Q8NGK4 314 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 RHBDD1Q8TEB9 315 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 LRRC61Q9BV99 259 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 FRMD8Q9BZ67 464 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CLPBQ9H078 707 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 SUDS3Q9H7L9 328 aaPredicted RBP15.67■□□□□ 0.1
RPAIN-206ENST00000539417 ARNT2Q9HBZ2 717 aa15.67■□□□□ 0.1
RPAIN-206ENST00000539417 CACNB4O00305 520 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 CCL22O00626 93 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 FLRT2O43155 660 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 ZNF189O75820 626 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 HOXC4P09017 264 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 MYCLP1P12525 358 aaPredicted RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 TCP1P17987 556 aaKnown RBP15.66■□□□□ 0.1
RPAIN-206ENST00000539417 TEAD1P28347 426 aa15.66■□□□□ 0.1
RPAIN-206ENST00000539417 HMGCLP35914 325 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms