RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 PPP2R3CQ969Q6 453 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PTERQ96BW5 349 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PLD4Q96BZ4 506 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 RCN3Q96D15 328 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 SGF29Q96ES7 293 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 DNAJC1Q96KC8 554 aaKnown RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 PRICKLE1Q96MT3 831 aaPredicted RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 ATOH8Q96SQ7 321 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 TTC1Q99614 292 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 C17orf80Q9BSJ5 609 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 TTPALQ9BTX7 342 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 TFB2MQ9H5Q4 396 aaKnown RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 INTS10Q9NVR2 710 aaKnown RBP9.24□□□□□ -0.93
DDB1-211ENST00000538280 HSFX1Q9UBD0 423 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 HCSTQ9UBK5 93 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 SEPT3Q9UH03 358 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 DNMT3LQ9UJW3 386 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 ADAMTS6Q9UKP5 1117 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 PSMD13Q9UNM6 376 aa9.24□□□□□ -0.93
DDB1-211ENST00000538280 CCDC189A1A4V9 331 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ILVBLA1L0T0 632 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CCL22O00626 93 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 UBFD1O14562 309 aaKnown RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 AIM2O14862 343 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ADAM12O43184 909 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CLDN11O75508 207 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 BAIAP3O94812 1187 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CXCL10P02778 98 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 F11P03951 625 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 FGF4P08620 206 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 SERPINF2P08697 491 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 MTHFD2P13995 350 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 HNRNPLP14866 589 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDB1-211ENST00000538280 ZNF37AP17032 561 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 CES1P23141 567 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ATP5C1P36542 298 aaKnown RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 RGRP47804 291 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 KCNC1P48547 511 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 THOP1P52888 689 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ARPP19P56211 112 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 IRX1P78414 480 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 CEACAM7Q14002 265 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CYTH1Q15438 398 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 SETMARQ53H47 684 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 SFT2D3Q587I9 215 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 GPR158Q5T848 1215 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 OGFRL1Q5TC84 451 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 OR52E8Q6IFG1 317 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 MRNIPQ6NTE8 343 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 AFTPHQ6ULP2 937 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 LARP4Q71RC2 724 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDB1-211ENST00000538280 LDB1Q86U70 411 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 PIM3Q86V86 326 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 TMEM173Q86WV6 379 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 SPNS2Q8IVW8 549 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 FBXO22Q8NEZ5 403 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 OR7D4Q8NG98 312 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 OR6P1Q8NGX9 317 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 OR4L1Q8NH43 312 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 SLC26A7Q8TE54 656 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 SH3RF2Q8TEC5 729 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 GIPC2Q8TF65 315 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 LPGAT1Q92604 370 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 DLG3Q92796 817 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CDKN2AIPNLQ96HQ2 116 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 MYRFLQ96LU7 910 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 TDRD1Q9BXT4 1180 aaKnown RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 UNKQ9C0B0 810 aaKnown RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 VCX3BQ9H321 246 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 WDR41Q9HAD4 459 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 EFCAB1Q9HAE3 211 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CYP4F12Q9HCS2 524 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 CATSPERZQ9NTU4 200 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 GTSE1Q9NYZ3 720 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 HACD3Q9P035 362 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 C6orf203Q9P0P8 240 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 UBA2Q9UBT2 640 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 TBC1D30Q9Y2I9 924 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 MED16Q9Y2X0 877 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 MTF2Q9Y483 593 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 ARIH1Q9Y4X5 557 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 SPO11Q9Y5K1 396 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ARL5AQ9Y689 179 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ZFP37Q9Y6Q3 630 aaPredicted RBP9.23□□□□□ -0.93
DDB1-211ENST00000538280 KMT2EQ8IZD2 1858 aa9.23□□□□□ -0.93
DDB1-211ENST00000538280 ZNF106Q9H2Y7 1883 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 MYO7AQ13402 2215 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 A0A0D9SEW6 157 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 PRSS51A0A1B0GVH4 220 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 DPPA5A6NC42 116 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 ZNF840PA6NDX5 716 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 H3BQ06 376 aaPredicted RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 GFRA2O00451 464 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 TRIM38O00635 465 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 ACOT8O14734 319 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 INSIG1O15503 277 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 KIF1CO43896 1103 aaKnown RBP9.22□□□□□ -0.93
DDB1-211ENST00000538280 KLK8O60259 260 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 SMIM24O75264 130 aa9.22□□□□□ -0.93
DDB1-211ENST00000538280 BCAS2O75934 225 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms