RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 CDH5P33151 784 aaPredicted RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 PPP1R2P41236 205 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 RGRP47804 291 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 CCL11P51671 97 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 YBEYP58557 167 aaPredicted RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 HHEXQ03014 270 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 BCL2L1Q07817 233 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 NAA30Q147X3 362 aaPredicted RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 PARP15Q460N3 678 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 CPZQ66K79 652 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 RAET1GQ6H3X3 334 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 MARK2Q7KZI7 788 aaKnown RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 LYSMD3Q7Z3D4 306 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 RASGRP3Q8IV61 690 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 TSEN2Q8NCE0 465 aaKnown RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 MSANTD4Q8NCY6 345 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 RXFP2Q8WXD0 754 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 ECHDC3Q96DC8 303 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 COQ10AQ96MF6 247 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 OR2M4Q96R27 311 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 MFRPQ9BY79 579 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 STN1Q9H668 368 aaKnown RBP11.09□□□□□ -0.63
CLPB-208ENST00000538021 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 B4GALT6Q9UBX8 382 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 LNPEPQ9UIQ6 1025 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 DNAJC12Q9UKB3 198 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 SLC17A4Q9Y2C5 497 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 TMEM98Q9Y2Y6 226 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 CSMD2Q7Z408 3487 aa11.09□□□□□ -0.63
CLPB-208ENST00000538021 CREB3O43889 395 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 NDUFA10O95299 355 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 EML2O95834 649 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 GRNP28799 593 aaKnown RBP11.08□□□□□ -0.64
CLPB-208ENST00000538021 ETV3P41162 512 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 BPIFB4P59827 614 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 DNASE1L3Q13609 305 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 EXOC3L4Q17RC7 722 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.08□□□□□ -0.64
CLPB-208ENST00000538021 HSCBQ8IWL3 235 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 FMR1NBQ8N0W7 255 aaPredicted RBP11.08□□□□□ -0.64
CLPB-208ENST00000538021 PYROXD2Q8N2H3 581 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 SFRP1Q8N474 314 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 GPT2Q8TD30 523 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 FNIP1Q8TF40 1166 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 CPA5Q8WXQ8 436 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 OR6C1Q96RD1 312 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 ACSS2Q9NR19 701 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 SIDT1Q9NXL6 827 aaKnown RBP11.08□□□□□ -0.64
CLPB-208ENST00000538021 MAN1B1Q9UKM7 699 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 PADI1Q9ULC6 663 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 SLC5A6Q9Y289 635 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 ADGRG4Q8IZF6 3080 aa11.08□□□□□ -0.64
CLPB-208ENST00000538021 ARHGAP10A1A4S6 786 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 ARGFXA6NJG6 315 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 LRCH4O75427 683 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PALMO75781 387 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 CYP11B1P15538 503 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PON1P27169 355 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
CLPB-208ENST00000538021 GPR1P46091 355 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 SEPHS1P49903 392 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 GFERP55789 205 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 SH3BP2P78314 561 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 NR6A1Q15406 480 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 CNGA3Q16281 694 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 NAA35Q5VZE5 725 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 JMJD6Q6NYC1 403 aaPredicted RBP11.07□□□□□ -0.64
CLPB-208ENST00000538021 ARCQ7LC44 396 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 STRADAQ7RTN6 431 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 SLFN11Q7Z7L1 901 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 GALNT13Q8IUC8 556 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PLXDC1Q8IUK5 500 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 FAM71AQ8IYT1 594 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 CT55Q8WUE5 264 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 FAM172AQ8WUF8 416 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 MARVELD3Q96A59 401 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 SH3KBP1Q96B97 665 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 DTD2Q96FN9 168 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 TBC1D10AQ9BXI6 508 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 ACTL8Q9H568 366 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 CATSPERBQ9H7T0 1116 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PDFQ9HBH1 243 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 KCTD5Q9NXV2 234 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 HOOK1Q9UJC3 728 aaKnown RBP11.07□□□□□ -0.64
CLPB-208ENST00000538021 ZNF451Q9Y4E5 1061 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 PCDHGA6Q9Y5G7 932 aa11.07□□□□□ -0.64
CLPB-208ENST00000538021 CELSR1Q9NYQ6 3014 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 HNRNPRO43390 633 aaKnown RBP11.06□□□□□ -0.64
CLPB-208ENST00000538021 KRT86O43790 486 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 DPM1O60762 260 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 PRAMEF11O60813 436 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 HEXIM1O94992 359 aaKnown RBP11.06□□□□□ -0.64
CLPB-208ENST00000538021 RECKO95980 971 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 PRF1P14222 555 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 VARSP26640 1264 aaKnown RBP11.06□□□□□ -0.64
CLPB-208ENST00000538021 VIPR1P32241 457 aa11.06□□□□□ -0.64
CLPB-208ENST00000538021 LEPRP48357 1165 aaKnown RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms