RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 ZBTB16Q05516 673 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 C6orf10Q5SRN2 563 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 C10orf76Q5T2E6 689 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 ISM2Q6H9L7 571 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 RFX8Q6ZV50 586 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 RRAGAQ7L523 313 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 RBM23Q86U06 439 aaKnown RBP5.77□□□□□ -1.49
CLIP1-207ENST00000536634 PIM3Q86V86 326 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 CCDC117Q8IWD4 279 aaPredicted RBP5.77□□□□□ -1.49
CLIP1-207ENST00000536634 PPTC7Q8NI37 304 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 SEPT8Q92599 483 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 KIF1BPQ96EK5 621 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 NLRP4Q96MN2 994 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 WDR83Q9BRX9 315 aaKnown RBP5.77□□□□□ -1.49
CLIP1-207ENST00000536634 FAM234AQ9H0X4 552 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 DECR2Q9NUI1 292 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 CDH22Q9UJ99 828 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 NBEAQ8NFP9 2946 aa5.77□□□□□ -1.49
CLIP1-207ENST00000536634 MYMKA6NI61 221 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 CD8B2A6NJW9 211 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 FOXO6A8MYZ6 492 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 PER2O15055 1255 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 NEURL1O76050 574 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 NOVP48745 357 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 POLE2P56282 527 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 RPS6KA2Q15349 733 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 HSDL1Q3SXM5 330 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 TANGO2Q6ICL3 276 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 CYB5R4Q7L1T6 521 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 DGLUCYQ7Z3D6 616 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 FTSJ3Q8IY81 847 aaKnown RBP5.76□□□□□ -1.49
CLIP1-207ENST00000536634 FAM110DQ8TAY7 271 aaPredicted RBP5.76□□□□□ -1.49
CLIP1-207ENST00000536634 SPPL3Q8TCT6 385 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 SLC2A12Q8TD20 617 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 OTUD7AQ8TE49 926 aaPredicted RBP5.76□□□□□ -1.49
CLIP1-207ENST00000536634 ATP6V0A1Q93050 837 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 C3orf49Q96BT1 292 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 ZNF689Q96CS4 500 aaPredicted RBP5.76□□□□□ -1.49
CLIP1-207ENST00000536634 CAMK1GQ96NX5 476 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 TAAR1Q96RJ0 339 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 C16orf70Q9BSU1 422 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 WACQ9BTA9 647 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.76□□□□□ -1.49
CLIP1-207ENST00000536634 PKP3Q9Y446 797 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 DOCK5Q9H7D0 1870 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 CELSR3Q9NYQ7 3312 aa5.76□□□□□ -1.49
CLIP1-207ENST00000536634 DSPP15924 2871 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 C17orf102A2RUQ5 167 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 KCNJ18B7U540 433 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 MSI1O43347 362 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 CRYABP02511 175 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 SMIM10L2AP0DMW4 78 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 SMIM10L2BP0DMW5 78 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 GHRP10912 638 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 SCP2P22307 547 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 PRPH2P23942 346 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 SERPINA4P29622 427 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 ALDH7A1P49419 539 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 FOXG1P55316 489 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 GAD2Q05329 585 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 FHL1Q13642 323 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 BTG3Q14201 252 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 GALNT3Q14435 633 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 PRTGQ2VWP7 1150 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 TBRG1Q3YBR2 411 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 USH1GQ495M9 461 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 HSP90AB4PQ58FF6 505 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 C10orf62Q5T681 223 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 ZSCAN25Q6NSZ9 544 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 HMBOX1Q6NT76 420 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 JMJD6Q6NYC1 403 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 TMEM200AQ86VY9 491 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 ATP8B4Q8TF62 1192 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 TRAPPC9Q96Q05 1148 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 SEC62Q99442 399 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 NPAS1Q99742 590 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 DDX23Q9BUQ8 820 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 HDHD5Q9BXW7 423 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 FRMD8Q9BZ67 464 aaPredicted RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 S1PR5Q9H228 398 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 CPVLQ9H3G5 476 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 PDE11AQ9HCR9 933 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 ZNF304Q9HCX3 659 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 ANAPC4Q9UJX5 808 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 KCND3Q9UK17 655 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 TNFSF13BQ9Y275 285 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 DTX4Q9Y2E6 619 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 CNOT1A5YKK6 2376 aaKnown RBP5.75□□□□□ -1.49
CLIP1-207ENST00000536634 MYH6P13533 1939 aa5.75□□□□□ -1.49
CLIP1-207ENST00000536634 WDR19Q8NEZ3 1342 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 FREM2Q5SZK8 3169 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 LOXHD1Q8IVV2 1947 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 CACNA1IQ9P0X4 2223 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 FAM90A10PA6NDY2 464 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 TSPY2A6NKD2 308 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 C2CD4DB7Z1M9 353 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 H0Y3Z8 333 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 RNF113AO15541 343 aaKnown RBP5.74□□□□□ -1.49
CLIP1-207ENST00000536634 PI15O43692 258 aa5.74□□□□□ -1.49
CLIP1-207ENST00000536634 CHRNA1P02708 482 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms