RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 TXLNBQ8N3L3 684 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 RNF10Q8N5U6 811 aaKnown RBP13.12□□□□□ -0.31
PRKDC-206ENST00000536429 UBL4BQ8N7F7 174 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 FAM181AQ8N9Y4 354 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 MRGPRX2Q96LB1 330 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 TBATAQ96M53 351 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 FCRL5Q96RD9 977 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 DUSP23Q9BVJ7 150 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 ADGRE3Q9BY15 652 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 FRMD8Q9BZ67 464 aaPredicted RBP13.12□□□□□ -0.31
PRKDC-206ENST00000536429 TMEM168Q9H0V1 697 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 CYP4F12Q9HCS2 524 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 FAM153AQ9UHL3 310 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 MOSPD1Q9UJG1 213 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 TMEM98Q9Y2Y6 226 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 DGKBQ9Y6T7 804 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 ZZEF1O43149 2961 aa13.12□□□□□ -0.31
PRKDC-206ENST00000536429 PRSS38A1L453 326 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 MIF4GDA9UHW6 222 aaKnown RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 TPP1O14773 563 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 INPP4BO15327 924 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 MTSS1O43312 755 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 TJP3O95049 919 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 NDST3O95803 873 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 TNFP01375 233 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ANXA6P08133 673 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 CTSEP14091 401 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 TEAD1P28347 426 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 SPINT3P49223 89 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 BLKP51451 505 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 OLIG2Q13516 323 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 HS1BP3Q53T59 392 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 C6orf132Q5T0Z8 1188 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 HES3Q5TGS1 186 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ZCCHC8Q6NZY4 707 aaKnown RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ADAMTSL4Q6UY14 1074 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ZNF765Q7L2R6 523 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 SLC25A41Q8N5S1 370 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 CCDC112Q8NEF3 446 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 BOCQ9BWV1 1114 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 TSGA10Q9BZW7 698 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 USP29Q9HBJ7 922 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 LZTFL1Q9NQ48 299 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 PHPT1Q9NRX4 125 aaPredicted RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 SIRPGQ9P1W8 387 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 RSPH14Q9UHP6 348 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 DNPEPQ9ULA0 475 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 CNOT6Q9ULM6 557 aaKnown RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ZNF711Q9Y462 761 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 PCYT1BQ9Y5K3 369 aaPredicted RBP13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ST14Q9Y5Y6 855 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 USP24Q9UPU5 2620 aa13.11□□□□□ -0.31
PRKDC-206ENST00000536429 ZFHX4Q86UP3 3567 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 LOC285095A0A1B0GVY8 99 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 FADS2P1A8MWK0 482 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 TNFRSF10CO14798 259 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KCNN4O15554 427 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KELP23276 732 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 ILKQ13418 452 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 ELOCQ15369 112 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 SIRPB2Q5JXA9 342 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 PERM1Q5SV97 790 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 ALS2CLQ60I27 953 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 DARS2Q6PI48 645 aaKnown RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 EFL1Q7Z2Z2 1120 aaKnown RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 NRROSQ86YC3 692 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 CDKL3Q8IVW4 592 aaPredicted RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 NRSN1Q8IZ57 195 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 FSTL5Q8N475 847 aaPredicted RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KYQ8NBH2 561 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 IPMKQ8NFU5 416 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 CCDC110Q8TBZ0 833 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 IFI44Q8TCB0 444 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 VAT1Q99536 393 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 GBA3Q9H227 469 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 CARS2Q9HA77 564 aaKnown RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 ZFYVE1Q9HBF4 777 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KCTD5Q9NXV2 234 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 TRHDEQ9UKU6 1024 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 SUFUQ9UMX1 484 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 SLC17A4Q9Y2C5 497 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 PLEKHM1Q9Y4G2 1056 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 OAS3Q9Y6K5 1087 aaKnown RBP13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KNTC1P50748 2209 aa13.1□□□□□ -0.31
PRKDC-206ENST00000536429 KRT86O43790 486 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 CCDC175P0C221 793 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 PSMB4P28070 264 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 CETN2P41208 172 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 GNPDA1P46926 289 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 NR0B2Q15466 257 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ANKRD20A2Q5SQ80 823 aa13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ZNF648Q5T619 568 aaPredicted RBP13.09□□□□□ -0.31
PRKDC-206ENST00000536429 ANKRD20A1Q5TYW2 823 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms