RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 PYGMP11217 842 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 ZNF30P17039 623 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 NFKB1P19838 968 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 DUSP3P51452 185 aaPredicted RBP14.22□□□□□ -0.13
UBE3B-206ENST00000536398 E2F1Q01094 437 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 DPTQ07507 201 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 NOMO1Q15155 1222 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 DOK6Q6PKX4 331 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 LYSMD3Q7Z3D4 306 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 TAF8Q7Z7C8 310 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 ZNF567Q8N184 647 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 QKIQ96PU8 341 aaKnown RBP eCLIP14.22□□□□□ -0.13
UBE3B-206ENST00000536398 LYSMD1Q96S90 227 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 ADGRE3Q9BY15 652 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 OSBPL8Q9BZF1 889 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 CCDC86Q9H6F5 360 aaKnown RBP14.22□□□□□ -0.13
UBE3B-206ENST00000536398 CARS2Q9HA77 564 aaKnown RBP14.22□□□□□ -0.13
UBE3B-206ENST00000536398 USP29Q9HBJ7 922 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 CNOT6Q9ULM6 557 aaKnown RBP14.22□□□□□ -0.13
UBE3B-206ENST00000536398 GPR34Q9UPC5 381 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 SHOC2Q9UQ13 582 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 CLCA2Q9UQC9 943 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 PLEKHM1Q9Y4G2 1056 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 ST14Q9Y5Y6 855 aa14.22□□□□□ -0.13
UBE3B-206ENST00000536398 LRP4O75096 1905 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 ZZEF1O43149 2961 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 ASXL3Q9C0F0 2248 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 SRRM3A6NNA2 597 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-206ENST00000536398 AURKAO14965 403 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 INPP4BO15327 924 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 FTCDO95954 541 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 GP1BAP07359 652 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 KELP23276 732 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 TEAD1P28347 426 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 RBL1P28749 1068 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 GNPDA1P46926 289 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 SPINT3P49223 89 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 RWDD2BP57060 319 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 CDK18Q07002 472 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 CDCP2Q5VXM1 449 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 KDELC1Q6UW63 502 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 ADAMTSL4Q6UY14 1074 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 GKN2Q86XP6 184 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 NRROSQ86YC3 692 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 NRSN1Q8IZ57 195 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 DCBLD1Q8N8Z6 715 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 FAM46DQ8NEK8 389 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 MAPK15Q8TD08 544 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 HTR3CQ8WXA8 447 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 CALR3Q96L12 384 aaKnown RBP14.21□□□□□ -0.13
UBE3B-206ENST00000536398 KCTD5Q9NXV2 234 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 KLHL8Q9P2G9 620 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-206ENST00000536398 RABGEF1Q9UJ41 708 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 PADI4Q9UM07 663 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 SUFUQ9UMX1 484 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 PCDHB1Q9Y5F3 818 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 SPO11Q9Y5K1 396 aa14.21□□□□□ -0.13
UBE3B-206ENST00000536398 PCYT1BQ9Y5K3 369 aaPredicted RBP14.21□□□□□ -0.13
UBE3B-206ENST00000536398 KMT2BQ9UMN6 2715 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 CCDC66A2RUB6 948 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 FADS2P1A8MWK0 482 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 H7C0C1 242 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 APOC4-APOC2K7ER74 178 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 PDE2AO00408 941 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 DDX3YO15523 660 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 APOC2P02655 101 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 SLC4A1P02730 911 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 AK4P27144 223 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 ATP5OP48047 213 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 WNT3AP56704 352 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 COPS2P61201 443 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 OTUD4Q01804 1114 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 KIF5AQ12840 1032 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 CCDC181Q5TID7 509 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 LVRNQ6Q4G3 990 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 MARK2Q7KZI7 788 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 ZNF765Q7L2R6 523 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 PID1Q7Z2X4 250 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 NLRP8Q86W28 1048 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 PROSER1Q86XN7 944 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 PDCD7Q8N8D1 485 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 ARL10Q8N8L6 244 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 ACTL9Q8TC94 416 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 SCG3Q8WXD2 468 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 GLMNQ92990 594 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 OXNAD1Q96HP4 312 aaPredicted RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 HIC2Q96JB3 615 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 ABCG4Q9H172 646 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 SPATS2LQ9NUQ6 558 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 AMFRQ9UKV5 643 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 SLC17A4Q9Y2C5 497 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 OAS3Q9Y6K5 1087 aaKnown RBP14.2□□□□□ -0.14
UBE3B-206ENST00000536398 CAPN6Q9Y6Q1 641 aa14.2□□□□□ -0.14
UBE3B-206ENST00000536398 HACD1B0YJ81 288 aa14.19□□□□□ -0.14
UBE3B-206ENST00000536398 NOBOXO60393 691 aa14.19□□□□□ -0.14
UBE3B-206ENST00000536398 NDST3O95803 873 aa14.19□□□□□ -0.14
UBE3B-206ENST00000536398 ATP1A1P05023 1023 aaKnown RBP14.19□□□□□ -0.14
UBE3B-206ENST00000536398 PTPN7P35236 360 aa14.19□□□□□ -0.14
UBE3B-206ENST00000536398 ADCY8P40145 1251 aa14.19□□□□□ -0.14
UBE3B-206ENST00000536398 CHRNA4P43681 627 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms