RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 PCDHGB2Q9Y5G2 931 aa11.28□□□□□ -0.6
TNFRSF1A-208ENST00000536194 PCNX2A6NKB5 2137 aa11.27□□□□□ -0.6
TNFRSF1A-208ENST00000536194 ZFC3H1O60293 1989 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CTAGE9A4FU28 777 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GOLGA6CA6NDK9 693 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GOLGA6BA6NDN3 693 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PDE2AO00408 941 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 BUD23O43709 281 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CBFA2T3O75081 653 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PIAS2O75928 621 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 AP2A1O95782 977 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FUCA1P04066 466 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 HOXC4P09017 264 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GOLGA6DP0CG33 693 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GIMD1P0DJR0 217 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 MYCLP1P12525 358 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 BPIP17213 487 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 SDHBP21912 280 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 DGKAP23743 735 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TEAD1P28347 426 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 HMGCLP35914 325 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FDFT1P37268 417 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GRIA1P42261 906 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ARRB1P49407 418 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CDK3Q00526 305 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 SEMA5AQ13591 1074 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PTK2BQ14289 1009 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PTPRCAPQ14761 206 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ALG11Q2TAA5 492 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ALS2CLQ60I27 953 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 RAET1GQ6H3X3 334 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ENPP7Q6UWV6 458 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GLT6D1Q7Z4J2 308 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TRIM74Q86UV6 250 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 NLRP8Q86W28 1048 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 NRSN1Q8IZ57 195 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CCDC89Q8N998 374 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 DEFB124Q8NES8 71 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 BAHD1Q8TBE0 780 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CCHCR1Q8TD31 782 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 OR1E3Q8WZA6 343 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TSACCQ96A04 125 aaPredicted RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 MAGOHBQ96A72 148 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PDXPQ96GD0 296 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PPP1R2P1Q96PQ5 205 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 LRRC40Q9H9A6 602 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FGF22Q9HCT0 170 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 BPIFA1Q9NP55 256 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 MRPL40Q9NQ50 206 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 RAB6BQ9NRW1 208 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 HOMER3Q9NSC5 361 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GOLGA6AQ9NYA3 693 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PKD2L2Q9NZM6 624 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 IL17CQ9P0M4 197 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PAK5Q9P286 719 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CNOT6Q9ULM6 557 aaKnown RBP11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 KCTD3Q9Y597 815 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ARL5AQ9Y689 179 aa11.27□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CACNB4O00305 520 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GAPDHSO14556 408 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 SCAMP1O15126 338 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 YKT6O15498 198 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FLRT2O43155 660 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PHF2O75151 1096 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CELA2BP08218 269 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 JUNDP17535 347 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 COILP38432 576 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TNNT3P45378 269 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GPR1P46091 355 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 DCDC1P59894 354 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TRIP13Q15645 432 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CCDC137Q6PK04 289 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ADAMTSL4Q6UY14 1074 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 MICALCLQ6ZW33 695 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PHACTR4Q8IZ21 702 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ZNF548Q8NEK5 533 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ATL2Q8NHH9 583 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 COX14Q96I36 57 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CAPZA3Q96KX2 299 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 WDR92Q96MX6 357 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 SRPK1Q96SB4 655 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 NAP1L3Q99457 506 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 LRRC61Q9BV99 259 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FRMD8Q9BZ67 464 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 CLPBQ9H078 707 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 FAM83DQ9H4H8 585 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TRABDQ9H4I3 376 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 HACD3Q9P035 362 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 NFKBIL1Q9UBC1 381 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 KLQ9UEF7 1012 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 APOBEC3BQ9UH17 382 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PCOLCE2Q9UKZ9 415 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TMPRSS11EQ9UL52 423 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 SAR1BQ9Y6B6 198 aa11.26□□□□□ -0.61
TNFRSF1A-208ENST00000536194 PRSS38A1L453 326 aa11.25□□□□□ -0.61
TNFRSF1A-208ENST00000536194 RGSL1A5PLK6 1076 aa11.25□□□□□ -0.61
TNFRSF1A-208ENST00000536194 ERI2A8K979 691 aaKnown RBP11.25□□□□□ -0.61
TNFRSF1A-208ENST00000536194 TRIM38O00635 465 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms