RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 FGF22Q9HCT0 170 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 MRPL40Q9NQ50 206 aaKnown RBP17.82■□□□□ 0.44
DDX55-204ENST00000536079 GOLGA6AQ9NYA3 693 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 PCDHGB2Q9Y5G2 931 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 ARL5AQ9Y689 179 aa17.82■□□□□ 0.44
DDX55-204ENST00000536079 PDE2AO00408 941 aaPredicted RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 CES2O00748 559 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 DFNA5O60443 496 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 AP2A1O95782 977 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 CSF2P04141 144 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 CELA2BP08218 269 aaPredicted RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 GIMD1P0DJR0 217 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 NME1P15531 152 aaKnown RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 TSHRP16473 764 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 DGKAP23743 735 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 COILP38432 576 aaPredicted RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 POLD2P49005 469 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 THOP1P52888 689 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 KIAA1024LP59773 190 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 CDK3Q00526 305 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 PUM1Q14671 1186 aaKnown RBP eCLIP17.81■□□□□ 0.44
DDX55-204ENST00000536079 TCEA2Q15560 299 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 TRIP13Q15645 432 aaPredicted RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 HENMT1Q5T8I9 393 aaKnown RBP17.81■□□□□ 0.44
DDX55-204ENST00000536079 ZNF765Q7L2R6 523 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 NRSN1Q8IZ57 195 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 CCDC89Q8N998 374 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 FAM83DQ9H4H8 585 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 WDR26Q9H7D7 661 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 RAB6BQ9NRW1 208 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 NEU2Q9Y3R4 380 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 SPTBN4Q9H254 2564 aa17.81■□□□□ 0.44
DDX55-204ENST00000536079 TOR1BO14657 336 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 INPP4BO15327 924 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PIAS2O75928 621 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 HOXC4P09017 264 aaPredicted RBP17.8■□□□□ 0.44
DDX55-204ENST00000536079 JUNDP17535 347 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 TCP1P17987 556 aaKnown RBP17.8■□□□□ 0.44
DDX55-204ENST00000536079 GPR1P46091 355 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 ARRB1P49407 418 aaPredicted RBP17.8■□□□□ 0.44
DDX55-204ENST00000536079 C1orf61Q13536 156 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PTK2BQ14289 1009 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 NLRP8Q86W28 1048 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PHACTR4Q8IZ21 702 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 CCHCR1Q8TD31 782 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PDXPQ96GD0 296 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 CLPBQ9H078 707 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 ARNT2Q9HBZ2 717 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PKD2L2Q9NZM6 624 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 IL17CQ9P0M4 197 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PAK5Q9P286 719 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PCOLCE2Q9UKZ9 415 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 TMPRSS11EQ9UL52 423 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 TMEM98Q9Y2Y6 226 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 PCYT1BQ9Y5K3 369 aaPredicted RBP17.8■□□□□ 0.44
DDX55-204ENST00000536079 CABIN1Q9Y6J0 2220 aa17.8■□□□□ 0.44
DDX55-204ENST00000536079 CTAGE9A4FU28 777 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 GAPDHSO14556 408 aaPredicted RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 GPR39O43194 453 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 CEACAM5P06731 702 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 MYCLP1P12525 358 aaPredicted RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 SDHBP21912 280 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 TEAD1P28347 426 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 HMGCLP35914 325 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 TERF1P54274 439 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 SRP54P61011 504 aaKnown RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 SEMA5AQ13591 1074 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 ZNF648Q5T619 568 aaPredicted RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 PSAPL1Q6NUJ1 521 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 ADAMTSL4Q6UY14 1074 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 SYT10Q6XYQ8 523 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 GSTA5Q7RTV2 222 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 GLT6D1Q7Z4J2 308 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 HID1Q8IV36 788 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 OXR1Q8N573 874 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 EID2Q8N6I1 236 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 OR52K1Q8NGK4 314 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 ATL2Q8NHH9 583 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 BAHD1Q8TBE0 780 aaPredicted RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 SETD7Q8WTS6 366 aaKnown RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 COX14Q96I36 57 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 WDR92Q96MX6 357 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 FRMD8Q9BZ67 464 aaPredicted RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 LRRC40Q9H9A6 602 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 ARFGAP3Q9NP61 516 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 HOMER3Q9NSC5 361 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 SAR1BQ9Y6B6 198 aa17.79■□□□□ 0.44
DDX55-204ENST00000536079 OAS3Q9Y6K5 1087 aaKnown RBP17.79■□□□□ 0.44
DDX55-204ENST00000536079 SPAARA0A1B0GVQ0 90 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 TCRBV7S3A2A0A539 114 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 RGSL1A5PLK6 1076 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 CACNB4O00305 520 aaPredicted RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 TRIM38O00635 465 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 PHF2O75151 1096 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 KCNK5O95279 499 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 CSRP1P21291 193 aaKnown RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 FDFT1P37268 417 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 VPS41P49754 854 aa17.78■□□□□ 0.44
DDX55-204ENST00000536079 NOVA1P51513 510 aaKnown RBP17.78■□□□□ 0.44
DDX55-204ENST00000536079 PPARDQ03181 441 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms