RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 MED16Q9Y2X0 877 aa13.35□□□□□ -0.27
VPS33B-202ENST00000535906 ANKRD66B4E2M5 251 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 H0Y626 953 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 TBL1XO60907 577 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 SUPT7LO94864 414 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 DEFB103AP81534 67 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 GALNT1Q10472 559 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 OR4D1Q15615 310 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 SETMARQ53H47 684 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 CARNMT1Q8N4J0 409 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 ADAMTS19Q8TE59 1207 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 L3HYPDHQ96EM0 354 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 INTS10Q9NVR2 710 aaKnown RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 VPS28Q9UK41 221 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 FAM50BQ9Y247 325 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 CCDC189A1A4V9 331 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 C2orf81A6NN90 581 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 GREM1O60565 184 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 HOXB8P17481 243 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PEX2P28328 305 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 FMO4P31512 558 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PEX19P40855 299 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 TRAF2Q12933 501 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PDAP1Q13442 181 aaKnown RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 LRRC36Q1X8D7 754 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 UNC50Q53HI1 259 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 RNF220Q5VTB9 566 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 TXNDC8Q6A555 127 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 CLEC6AQ6EIG7 209 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 HERC6Q8IVU3 1022 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PELI3Q8N2H9 469 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 ARL14EPQ8N8R7 260 aaPredicted RBP13.34□□□□□ -0.27
VPS33B-202ENST00000535906 LPGAT1Q92604 370 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 BHMTQ93088 406 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 MEAF6Q9HAF1 191 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 SLC24A3Q9HC58 644 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PACSIN3Q9UKS6 424 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 TBX21Q9UL17 535 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 PLXNA4Q9HCM2 1894 aa13.34□□□□□ -0.27
VPS33B-202ENST00000535906 MAP3K13O43283 966 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PEX1O43933 1283 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PENKP01210 267 aaPredicted RBP13.33□□□□□ -0.27
VPS33B-202ENST00000535906 SPATA31D3P0C874 917 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 MTHFD2P13995 350 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 CES1P23141 567 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PPP3CCP48454 512 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 CDH13P55290 713 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 HERVK_113P63132 956 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 NFKB2Q00653 900 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 SATB1Q01826 763 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 TRIP10Q15642 601 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PPP1R3AQ16821 1122 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PIGGQ5H8A4 983 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PAQR3Q6TCH7 311 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 AFTPHQ6ULP2 937 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 BNC2Q6ZN30 1099 aaPredicted RBP13.33□□□□□ -0.27
VPS33B-202ENST00000535906 SPATA31D4Q6ZUB0 917 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PIANPQ8IYJ0 282 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 PHC3Q8NDX5 983 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 TTC16Q8NEE8 873 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 WFDC5Q8TCV5 224 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 RCN3Q96D15 328 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 TRAPPC9Q96Q05 1148 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 DDX50Q9BQ39 737 aaKnown RBP13.33□□□□□ -0.27
VPS33B-202ENST00000535906 FEM1AQ9BSK4 669 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 HERC2P3Q9BVR0 1158 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 ERVK-6Q9BXR3 956 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 RC3H2Q9HBD1 1191 aaKnown RBP13.33□□□□□ -0.27
VPS33B-202ENST00000535906 POPDC3Q9HBV1 291 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 BPIFA1Q9NP55 256 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 SPATS2LQ9NUQ6 558 aaKnown RBP13.33□□□□□ -0.27
VPS33B-202ENST00000535906 TRAF6Q9Y4K3 522 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 INSL5Q9Y5Q6 135 aa13.33□□□□□ -0.27
VPS33B-202ENST00000535906 LRRC14BA6NHZ5 514 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 UBXN8O00124 270 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 PPP6CO00743 305 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 SMIM24O75264 130 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 SIX3O95343 332 aaPredicted RBP13.33□□□□□ -0.28
VPS33B-202ENST00000535906 URODP06132 367 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 UQCRBP14927 111 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 LPOP22079 712 aaPredicted RBP13.33□□□□□ -0.28
VPS33B-202ENST00000535906 PSMA3P25788 255 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 ILF2Q12905 390 aaKnown RBP13.33□□□□□ -0.28
VPS33B-202ENST00000535906 ZNF423Q2M1K9 1284 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 PSAPL1Q6NUJ1 521 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 CYHR1Q6ZMK1 362 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 PGAM4Q8N0Y7 254 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 EFHBQ8N7U6 833 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 DIS3LQ8TF46 1054 aaKnown RBP13.33□□□□□ -0.28
VPS33B-202ENST00000535906 TUBGCP5Q96RT8 1024 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 ATOH8Q96SQ7 321 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 CDRT15Q96T59 188 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 GALPQ9UBC7 116 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 LHX3Q9UBR4 397 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 FKBPLQ9UIM3 349 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 PSMD13Q9UNM6 376 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms