RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 PELI3Q8N2H9 469 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 TAB3Q8N5C8 712 aaPredicted RBP20.48■□□□□ 0.87
CHFR-209ENST00000535181 BRSK1Q8TDC3 778 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 PLEKHG4BQ96PX9 1271 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 TEX101Q9BY14 249 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 DDX47Q9H0S4 455 aaKnown RBP20.48■□□□□ 0.87
CHFR-209ENST00000535181 FAM83DQ9H4H8 585 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 WDR26Q9H7D7 661 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 IL17CQ9P0M4 197 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 CD84Q9UIB8 345 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 PCDHGB2Q9Y5G2 931 aa20.48■□□□□ 0.87
CHFR-209ENST00000535181 K7ESM1 405 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 CACNB4O00305 520 aaPredicted RBP20.47■□□□□ 0.87
CHFR-209ENST00000535181 APRTP07741 180 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 TPSB2P20231 275 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 SDHBP21912 280 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 LMAN1P49257 510 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 ARRB1P49407 418 aaPredicted RBP20.47■□□□□ 0.87
CHFR-209ENST00000535181 CCT8P50990 548 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 BASP1P80723 227 aaKnown RBP20.47■□□□□ 0.87
CHFR-209ENST00000535181 PDE1BQ01064 536 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 CDH17Q12864 832 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 TPSAB1Q15661 275 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 TPRG1LQ5T0D9 272 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 PDPK2PQ6A1A2 396 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 RAET1GQ6H3X3 334 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 KDM7AQ6ZMT4 941 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 SCAMP4Q969E2 229 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 FUBP1Q96AE4 644 aaKnown RBP20.47■□□□□ 0.87
CHFR-209ENST00000535181 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.47■□□□□ 0.87
CHFR-209ENST00000535181 FNDC3AQ9Y2H6 1198 aaKnown RBP20.47■□□□□ 0.87
CHFR-209ENST00000535181 OR1A2Q9Y585 309 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 CFAP54Q96N23 3096 aa20.47■□□□□ 0.87
CHFR-209ENST00000535181 DNAH14Q0VDD8 3507 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 GOLGA8CPA6NN73 597 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 C2orf81A6NN90 581 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 C4orf47A7E2U8 309 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 AP3B1O00203 1094 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 PCDHGA12O60330 932 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 CRTAMO95727 393 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 MYCLP1P12525 358 aaPredicted RBP20.46■□□□□ 0.87
CHFR-209ENST00000535181 BPIP17213 487 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 KELP23276 732 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 HTR1BP28222 390 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 GPR1P46091 355 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 HEATR4Q86WZ0 1026 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 GPR26Q8NDV2 337 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 OR2I1PQ8NGU4 316 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 ZSCAN5AQ9BUG6 496 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 RIOK2Q9BVS4 552 aaKnown RBP20.46■□□□□ 0.87
CHFR-209ENST00000535181 IL21RQ9HBE5 538 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 CASS4Q9NQ75 786 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 PHPT1Q9NRX4 125 aaPredicted RBP20.46■□□□□ 0.87
CHFR-209ENST00000535181 TM7SF3Q9NS93 570 aa20.46■□□□□ 0.87
CHFR-209ENST00000535181 DMXL1Q9Y485 3027 aa20.45■□□□□ 0.87
CHFR-209ENST00000535181 ZNF106Q9H2Y7 1883 aaKnown RBP20.45■□□□□ 0.86
CHFR-209ENST00000535181 SLC30A4O14863 429 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 SLC4A1P02730 911 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 CSF2P04141 144 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 NME1P15531 152 aaKnown RBP20.45■□□□□ 0.86
CHFR-209ENST00000535181 LPOP22079 712 aaPredicted RBP20.45■□□□□ 0.86
CHFR-209ENST00000535181 CDK3Q00526 305 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 GPS1Q13098 491 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 SHBQ15464 509 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 DBX2Q6ZNG2 339 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 SYDE1Q6ZW31 735 aaPredicted RBP20.45■□□□□ 0.86
CHFR-209ENST00000535181 ZNF572Q7Z3I7 529 aaPredicted RBP20.45■□□□□ 0.86
CHFR-209ENST00000535181 TRAM1L1Q8N609 369 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 TBATAQ96M53 351 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 WDR92Q96MX6 357 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 PKP3Q9Y446 797 aa20.45■□□□□ 0.86
CHFR-209ENST00000535181 TNFRSF10CO14798 259 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 EPHA8P29322 1005 aaPredicted RBP20.44■□□□□ 0.86
CHFR-209ENST00000535181 PTGIRP43119 386 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 EIF2B5Q13144 721 aaKnown RBP20.44■□□□□ 0.86
CHFR-209ENST00000535181 PTK6Q13882 451 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 KCNJ11Q14654 390 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 PPP1R7Q15435 360 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 TRIP13Q15645 432 aaPredicted RBP20.44■□□□□ 0.86
CHFR-209ENST00000535181 PPP1R21Q6ZMI0 780 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 DNAAF3Q8N9W5 541 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 OR52K1Q8NGK4 314 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 COX14Q96I36 57 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 AGAP2Q99490 1192 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 CDC23Q9UJX2 597 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 CDV3Q9UKY7 258 aaKnown RBP20.44■□□□□ 0.86
CHFR-209ENST00000535181 ARL5AQ9Y689 179 aa20.44■□□□□ 0.86
CHFR-209ENST00000535181 LRP4O75096 1905 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 STX7O15400 261 aaKnown RBP20.43■□□□□ 0.86
CHFR-209ENST00000535181 LDB2O43679 373 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 PSMA3P25788 255 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 SPAM1P38567 509 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 VPS41P49754 854 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 ZNF140P52738 457 aaPredicted RBP20.43■□□□□ 0.86
CHFR-209ENST00000535181 HNRNPKP61978 463 aaKnown RBP eCLIP20.43■□□□□ 0.86
CHFR-209ENST00000535181 LAMB3Q13751 1172 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 DHX34Q14147 1143 aaKnown RBP20.43■□□□□ 0.86
CHFR-209ENST00000535181 SPATA4Q8NEY3 305 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 OR56A4Q8NGH8 313 aa20.43■□□□□ 0.86
CHFR-209ENST00000535181 SAP25Q8TEE9 199 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms