RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 APPL1Q9UKG1 709 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 GPR34Q9UPC5 381 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 PCDHGA7Q9Y5G6 932 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 DOPEY1Q5JWR5 2465 aa10.06□□□□□ -0.8
CLSTN3-203ENST00000534830 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PRSS38A1L453 326 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NPIPB15A6NHN6 443 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 GOLGA6L19H0YKK7 550 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CACNB4O00305 520 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 MATN3O15232 486 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PROSCO94903 275 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CPP00450 1065 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PRLP01236 227 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CEACAM5P06731 702 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PDHA1P08559 390 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 H2AFZP0C0S5 128 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 JMJD7P0C870 316 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CYP2A6P11509 494 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 MYCLP1P12525 358 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 HGFP14210 728 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PNLIPP16233 465 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CCNCP24863 283 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 UGT1A5P35504 534 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CASRP41180 1078 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PTSQ03393 145 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 DPTQ07507 201 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 SLC10A2Q12908 348 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 HLTFQ14527 1009 aaKnown RBP eCLIP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 ACOX1Q15067 660 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PDK2Q15119 407 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PTPRRQ15256 657 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NFKBIBQ15653 356 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 HADHQ16836 314 aaKnown RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 H2AFVQ71UI9 128 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 RD3Q7Z3Z2 195 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 HSD11B1LQ7Z5J1 315 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 TSPAN33Q86UF1 283 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NLRP8Q86W28 1048 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NRROSQ86YC3 692 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 BBS5Q8N3I7 341 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PQLC3Q8N755 202 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CCL4L1Q8NHW4 92 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 GPBAR1Q8TDU6 330 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 HTR3CQ8WXA8 447 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 CCDC74AQ96AQ1 378 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NUS1Q96E22 293 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 DTD2Q96FN9 168 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 SCARF2Q96GP6 870 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 LIN37Q96GY3 246 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 DNAJC7Q99615 494 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 ZNF670Q9BS34 389 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PACSIN1Q9BY11 444 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 FRMD8Q9BZ67 464 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 TMEM168Q9H0V1 697 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 ADNPQ9H2P0 1102 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 NT5MQ9NPB1 228 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 SIRPGQ9P1W8 387 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 GULP1Q9UBP9 304 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PLEKHB1Q9UF11 243 aaPredicted RBP10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PISDQ9UG56 409 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 AMACRQ9UHK6 382 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 DOLKQ9UPQ8 538 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 PCDHB11Q9Y5F2 797 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 ST14Q9Y5Y6 855 aa10.05□□□□□ -0.8
CLSTN3-203ENST00000534830 ABCA12Q86UK0 2595 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 AGRPO00253 132 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 KRT38O76015 456 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 SOD1P00441 154 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 GLB1P16278 677 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 WT1P19544 449 aaPredicted RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 CES1P23141 567 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 KELP23276 732 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 MAN1A1P33908 653 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 ETV3P41162 512 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 CCL7P80098 99 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 CDK3Q00526 305 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 ZFP36L1Q07352 338 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 EIF3IQ13347 325 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 KRT81Q14533 505 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 TCEA2Q15560 299 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 IFI16Q16666 785 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 CERCAMQ5T4B2 595 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 ARMC12Q5T9G4 340 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 TAF8Q7Z7C8 310 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 B3GNT8Q7Z7M8 397 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 SFTPA2Q8IWL1 248 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 RAVER1Q8IY67 606 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 ARRDC2Q8TBH0 407 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 PDCD6IPQ8WUM4 868 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 NSMCE1Q8WV22 266 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 PTCD2Q8WV60 388 aaKnown RBP10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 FOXP3Q9BZS1 431 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 STRADBQ9C0K7 418 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 LRRN3Q9H3W5 708 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 WDR26Q9H7D7 661 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 CYP4F12Q9HCS2 524 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 LCMT1Q9UIC8 334 aa10.04□□□□□ -0.8
CLSTN3-203ENST00000534830 ANAPC2Q9UJX6 822 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms