RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-215ENST00000533961 HNRNPH1P31943 449 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 RAD23BP54727 409 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 EEF1A2Q05639 463 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 DRAP1Q14919 205 aaPredicted RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 CALCRLQ16602 461 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 GSTA3Q16772 222 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 PPP6R3Q5H9R7 873 aaPredicted RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 LRIF1Q5T3J3 769 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 GKAP1Q5VSY0 366 aaPredicted RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 FAM69BQ5VUD6 431 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 TMEM198Q66K66 360 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 INO80CQ6PI98 192 aaPredicted RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 TMTC3Q6ZXV5 915 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 DSELQ8IZU8 1212 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 NAGSQ8N159 534 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 PDILTQ8N807 584 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 FRMD1Q8N878 549 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 PPHLN1Q8NEY8 458 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 SPATA20Q8TB22 786 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 HDAC2Q92769 488 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 IGSF8Q969P0 613 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 MTBPQ96DY7 904 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 BICD1Q96G01 975 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 SCMH1Q96GD3 660 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 C3orf30Q96M34 536 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 C7orf26Q96N11 449 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 H2AFJQ9BTM1 129 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 HINT3Q9NQE9 182 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 BLOC1S4Q9NUP1 217 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 SEPT11Q9NVA2 429 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 LIMA1Q9UHB6 759 aaKnown RBP3.41□□□□□ -1.86
RDX-215ENST00000533961 HAO1Q9UJM8 370 aa3.41□□□□□ -1.86
RDX-215ENST00000533961 USP17L23D6RBM5 183 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 DOK2O60496 412 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 PAGE4O60829 102 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 TIPRLO75663 272 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 RNASEH2AO75792 299 aaKnown RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 SEC14L2O76054 403 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 NDUFB4O95168 129 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 EGFP01133 1207 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 CDAP32320 146 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 DCAF7P61962 342 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 SETQ01105 290 aaPredicted RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 FOXD4Q12950 439 aaPredicted RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 CDC16Q13042 620 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 SF3B4Q15427 424 aaKnown RBP eCLIP3.4□□□□□ -1.87
RDX-215ENST00000533961 CCDC96Q2M329 555 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 ZNF718Q3SXZ3 478 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 ACCSLQ4AC99 568 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 NAA35Q5VZE5 725 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 DSTYKQ6XUX3 929 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 PQLC2Q6ZP29 291 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 IKBIPQ70UQ0 350 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 ZNF34Q8IZ26 560 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 SPATA6LQ8N4H0 392 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 ACVR1CQ8NER5 493 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 BEST2Q8NFU1 509 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 ETNPPLQ8TBG4 499 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 SLITRK1Q96PX8 696 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 OR1F2PQ96R84 312 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 KXD1Q9BQD3 176 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 SRSF8Q9BRL6 282 aaKnown RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 CSTL1Q9H114 145 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 PDCL3Q9H2J4 239 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 PIGMQ9H3S5 423 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 RETREG1Q9H6L5 497 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 FBRSL1Q9HCM7 1045 aaKnown RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 RANGRFQ9HD47 186 aaPredicted RBP3.4□□□□□ -1.87
RDX-215ENST00000533961 PADI3Q9ULW8 664 aa3.4□□□□□ -1.87
RDX-215ENST00000533961 A0A087WYN8 130 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 A0A0B4J293 547 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 PLRG1O43660 514 aaKnown RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 PLGP00747 810 aaPredicted RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 IRF1P10914 325 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 DLX5P56178 289 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ILF3Q12906 894 aaKnown RBP eCLIP3.39□□□□□ -1.87
RDX-215ENST00000533961 KIAA0930Q6ICG6 404 aaPredicted RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 LINGO2Q7L985 606 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 SRBD1Q8N5C6 995 aaKnown RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 SCCPDHQ8NBX0 429 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ZNF114Q8NC26 417 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 AGBL3Q8NEM8 1001 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 LILRB1Q8NHL6 650 aaPredicted RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 SPATA22Q8NHS9 363 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 SMARCE1Q969G3 411 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ORAI1Q96D31 301 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ELMOD3Q96FG2 381 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 SLC41A2Q96JW4 573 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 GAD1Q99259 594 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 GAREM1Q9H706 876 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 MMP25Q9NPA2 562 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 RRP7BPQ9NSQ0 103 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ACSS1Q9NUB1 689 aaPredicted RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 SMARCAL1Q9NZC9 954 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 SLCO3A1Q9UIG8 710 aa3.39□□□□□ -1.87
RDX-215ENST00000533961 ATXN2Q99700 1313 aaKnown RBP3.39□□□□□ -1.87
RDX-215ENST00000533961 CPED1A4D0V7 1026 aa3.38□□□□□ -1.87
RDX-215ENST00000533961 PI4KAP2A4QPH2 592 aa3.38□□□□□ -1.87
RDX-215ENST00000533961 BMPR1BO00238 502 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms