RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 GPR63Q9BZJ6 419 aa10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 FBRSQ9HAH7 460 aa10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 POLMQ9NP87 494 aaPredicted RBP10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 DYRK4Q9NR20 520 aa10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 DLGAP2Q9P1A6 1054 aa10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 SMG5Q9UPR3 1016 aaKnown RBP10.94□□□□□ -0.66
CCDC90B-218ENST00000533761 A0A0J9YYE9 177 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 CAPN8A6NHC0 703 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 STX7O15400 261 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 LDB2O43679 373 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 RNASEH1O60930 286 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 GJB3O75712 270 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 RPP40O75818 363 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 TRBC1P01850 177 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 MT-ND3P03897 115 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ERVK-10P10266 1014 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 NMBRP28336 390 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 HPDP32754 393 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 HMGCLP35914 325 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 CXCL12P48061 93 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 POLD2P49005 469 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 CCR3P51677 355 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 PPP2R2AP63151 447 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ACVR1Q04771 509 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 MTAPQ13126 283 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 CAMK2GQ13555 558 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 GAS6Q14393 721 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 SEPT7Q16181 437 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 QPCTQ16769 361 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 HSP90AA5PQ58FG0 334 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 RNF187Q5TA31 235 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 FAM46CQ5VWP2 391 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 NEPROQ6NW34 567 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ERAP2Q6P179 960 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 TRMT10BQ6PF06 316 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 AFTPHQ6ULP2 937 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 GALNT7Q86SF2 657 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 CNTN4Q8IWV2 1026 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ZNF366Q8N895 744 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 OR6P1Q8NGX9 317 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 DCAKDQ8WVC6 231 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 TLCD1Q96CP7 247 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ECHDC3Q96DC8 303 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 MRRFQ96E11 262 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 LYSMD1Q96S90 227 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 C1QTNF1Q9BXJ1 281 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 IQCGQ9H095 443 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ZFYVE1Q9HBF4 777 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 SSU72Q9NP77 194 aaKnown RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 PRSS16Q9NQE7 514 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 RAD18Q9NS91 495 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 NLE1Q9NVX2 485 aaPredicted RBP10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 NKIRAS1Q9NYS0 192 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 DKK3Q9UBP4 350 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 APPL1Q9UKG1 709 aa10.93□□□□□ -0.66
CCDC90B-218ENST00000533761 ZDBF2Q9HCK1 2354 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 A0A1W2PQF6 199 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PRR33A8MZF0 331 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 GPR37L1O60883 481 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 SIN3BO75182 1162 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PIGNO95427 931 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PRLP01236 227 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 UGT2B4P06133 528 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PDHA1P08559 390 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 ZNF30P17039 623 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PMLP29590 882 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 ARHGEF7Q14155 803 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 ZNF805Q5CZA5 627 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 TNFAIP8L3Q5GJ75 292 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 UBAP2Q5T6F2 1119 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 C9orf64Q5T6V5 341 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 ESRP1Q6NXG1 681 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 CES3Q6UWW8 571 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 KDM7AQ6ZMT4 941 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 STRA8Q7Z7C7 330 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 KRTAP1-3Q8IUG1 177 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 SRRM1Q8IYB3 904 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 CAMKK1Q8N5S9 505 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 TMIEQ8NEW7 156 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 GRIN3AQ8TCU5 1115 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 PIH1D2Q8WWB5 315 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 SCRN2Q96FV2 425 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 CABS1Q96KC9 395 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 FCRL3Q96P31 734 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 SPOCK3Q9BQ16 436 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 CDH19Q9H159 772 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 IARS2Q9NSE4 1012 aaKnown RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 SPATA6Q9NWH7 488 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 EURLQ9NYK6 297 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 CORO1CQ9ULV4 474 aaPredicted RBP10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 ZNF711Q9Y462 761 aa10.92□□□□□ -0.66
CCDC90B-218ENST00000533761 C1orf232A0A0U1RR37 186 aa10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 LEFTY1O75610 366 aa10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 AVPR2P30518 371 aa10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 ZNF140P52738 457 aaPredicted RBP10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 SLC18A1P54219 525 aa10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 SFSWAPQ12872 951 aaKnown RBP10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 MSLNQ13421 630 aaPredicted RBP10.91□□□□□ -0.66
CCDC90B-218ENST00000533761 IHHQ14623 411 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms