RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CSNK2A3Q8NEV1 391 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 SECTM1Q8WVN6 248 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 DNAAF4Q8WXU2 420 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 HES6Q96HZ4 224 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 INPP4AQ96PE3 977 aaPredicted RBP2.7□□□□□ -1.98
ATM-220ENST00000533526 PKP4Q99569 1192 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 EPYCQ99645 322 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 PCGF1Q9BSM1 259 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 FBRSL1Q9HCM7 1045 aaKnown RBP2.7□□□□□ -1.98
ATM-220ENST00000533526 LTB4R2Q9NPC1 389 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 TMEM30AQ9NV96 361 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 UBA2Q9UBT2 640 aaPredicted RBP2.7□□□□□ -1.98
ATM-220ENST00000533526 AMDHD2Q9Y303 409 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 CAPN7Q9Y6W3 813 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 MAU2Q9Y6X3 613 aa2.7□□□□□ -1.98
ATM-220ENST00000533526 PDS5AQ29RF7 1337 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 ZNF587BE7ETH6 402 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 J3KRW8 73 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 BMPR1BO00238 502 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 KRT86O43790 486 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 DAB1O75553 588 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 SLC25A12O75746 678 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ZNF432O94892 652 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 CAMTA2O94983 1202 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 RTN3O95197 1032 aaPredicted RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 IPO7O95373 1038 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 FTCDO95954 541 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 AFPP02771 609 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 ATP1A3P13637 1013 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 S1PR1P21453 382 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 GNL1P36915 607 aaPredicted RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 CCR9P51686 369 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ZNF132P52740 706 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ACSM2AQ08AH3 577 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 HYAL1Q12794 435 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 CSTF3Q12996 717 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 ZBTB17Q13105 803 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 FRG1Q14331 258 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 KRT81Q14533 505 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ADIPOQQ15848 244 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 MYLK3Q32MK0 819 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 GPATCH4Q5T3I0 446 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 DUS1LQ6P1R4 473 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 BRAT1Q6PJG6 821 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 GDPD4Q6W3E5 623 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 Q6ZTC4 211 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 FOXL2NBQ6ZUU3 175 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 C9orf139Q6ZV77 190 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 SATL1Q86VE3 508 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP2.69□□□□□ -1.98
ATM-220ENST00000533526 PAF1Q8N7H5 531 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ZNF441Q8N8Z8 693 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 PPHLN1Q8NEY8 458 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 SPATA22Q8NHS9 363 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 SPATA3Q8NHX4 192 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 THAP6Q8TBB0 222 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ABTB1Q969K4 478 aaPredicted RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 INTS12Q96CB8 462 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 MMABQ96EY8 250 aaPredicted RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 C7orf26Q96N11 449 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 TTC14Q96N46 770 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 QRFPRQ96P65 431 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 MTERF1Q99551 399 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 C1QTNF5Q9BXJ0 243 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 USP44Q9H0E7 712 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 SIL1Q9H173 461 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 MAGIXQ9H6Y5 334 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 EHD2Q9NZN4 543 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ZNF69Q9UC07 566 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 ACSL5Q9ULC5 683 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 PADI1Q9ULC6 663 aa2.69□□□□□ -1.98
ATM-220ENST00000533526 TDRD9Q8NDG6 1382 aaKnown RBP2.69□□□□□ -1.98
ATM-220ENST00000533526 ASPDHA6ND91 283 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 VCYO14598 125 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 TGFB1I1O43294 461 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 JRKO75564 520 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 DDX58O95786 925 aaKnown RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 IGKV3-20P01619 116 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 IGLV2-11P01706 119 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 ATP1A1P05023 1023 aaKnown RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 CLEC3BP05452 202 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 CETPP11597 493 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 CDH2P19022 906 aaPredicted RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 UBA1P22314 1058 aaKnown RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 ANOS1P23352 680 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 CHMP24386 653 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 PRCPP42785 496 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 BRWD1-AS2P59051 145 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 TFAP4Q01664 338 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 SLC20A2Q08357 652 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 NIPAL4Q0D2K0 466 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 MAD2L1Q13257 205 aaPredicted RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 DECR1Q16698 335 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 ALG11Q2TAA5 492 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 CXorf66Q5JRM2 361 aaPredicted RBP2.68□□□□□ -1.98
ATM-220ENST00000533526 TTI2Q6NXR4 508 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 TMTC3Q6ZXV5 915 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 DPPA4Q7L190 304 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 CPLX4Q7Z7G2 160 aa2.68□□□□□ -1.98
ATM-220ENST00000533526 HACE1Q8IYU2 909 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms