RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 PDZK1P1A8MUH7 402 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 EPN2O95208 641 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PRKCGP05129 697 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 EIF2S1P05198 315 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 GSTM1P09488 218 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 ZNF135P52742 658 aaPredicted RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 PRKAA2P54646 552 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 STK11Q15831 433 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 DPYSL2Q16555 572 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 ZNF697Q5TEC3 545 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 NAPRTQ6XQN6 538 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 RPS27LQ71UM5 84 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 DSELQ8IZU8 1212 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 DCAKDQ8WVC6 231 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 GLMNQ92990 594 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 MAELQ96JY0 434 aaKnown RBP12.23□□□□□ -0.45
BDNF-218ENST00000533246 BDH2Q9BUT1 245 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PADI4Q9UM07 663 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 PCDHB12Q9Y5F1 795 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
BDNF-218ENST00000533246 TMEM114B3SHH9 223 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 DLGAP3O95886 979 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 ACOX1Q15067 660 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 VPS26BQ4G0F5 336 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 MTX3Q5HYI7 312 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 RALGPS2Q86X27 583 aaPredicted RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 RP9Q8TA86 221 aaKnown RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 SLC35F5Q8WV83 523 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 HMCESQ96FZ2 354 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 TEKT5Q96M29 485 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 DEFB118Q96PH6 123 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 RMND5AQ9H871 391 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 VPS51Q9UID3 782 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 FZD10Q9ULW2 581 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 TMEM221A6NGB7 291 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 IDH3BO43837 385 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 ULK1O75385 1050 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 TM7SF2O76062 418 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 CHI3L1P36222 383 aaPredicted RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 RPS24P62847 133 aaKnown RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 LSM12Q3MHD2 195 aaKnown RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 BRMS1LQ5PSV4 323 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 FAM45BPQ6NSW5 357 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 SPESP1Q6UW49 350 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 ZDHHC13Q8IUH4 622 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 CLYBLQ8N0X4 340 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 FAM45AQ8TCE6 357 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 C10orf82Q8WW14 230 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 TPK1Q9H3S4 243 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 NOL11Q9H8H0 719 aaKnown RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 SPAG4Q9NPE6 437 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 FBXW11Q9UKB1 542 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 RWDD3Q9Y3V2 267 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 MYH7P12883 1935 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 TNFAIP8O95379 198 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 RXRGP48443 463 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 POU5F1Q01860 360 aaKnown RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 ACSM2AQ08AH3 577 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 PCBP1Q15365 356 aaKnown RBP eCLIP12.22□□□□□ -0.45
BDNF-218ENST00000533246 CTC1Q2NKJ3 1217 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 ACSM2BQ68CK6 577 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 NCBP2-AS2Q69YL0 99 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 ZFP1Q6P2D0 407 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 KLHL35Q6PF15 583 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 SLC24A5Q71RS6 500 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 OSTM1Q86WC4 334 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 RAB42Q8N4Z0 105 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 SLCO2A1Q92959 643 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 C7orf26Q96N11 449 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 GBA3Q9H227 469 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 MIEF1Q9NQG6 463 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 CCDC177Q9NQR7 707 aaPredicted RBP12.22□□□□□ -0.45
BDNF-218ENST00000533246 COMMD8Q9NX08 183 aa12.22□□□□□ -0.45
BDNF-218ENST00000533246 PSMD11O00231 422 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 TSPAN4O14817 238 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 IPO13O94829 963 aaKnown RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 IGSF6O95976 241 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 RPLP2P05387 115 aaKnown RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 JAK1P23458 1154 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 TPTEP56180 551 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 LSM3P62310 102 aaKnown RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 RELAQ04206 551 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 FOLH1Q04609 750 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 MAPKAPK3Q16644 382 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 GPR156Q8NFN8 814 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 HEXDCQ8WVB3 486 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 PLEKHA8Q96JA3 519 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 RPL10LQ96L21 214 aaKnown RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 TSSK3Q96PN8 268 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 GPR21Q99679 349 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 FAM126AQ9BYI3 521 aaPredicted RBP12.21□□□□□ -0.45
BDNF-218ENST00000533246 RIBC2Q9H4K1 309 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 GKN1Q9NS71 199 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.21□□□□□ -0.45
BDNF-218ENST00000533246 FKBP14Q9NWM8 211 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 SCN11AQ9UI33 1791 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 ZBTB14O43829 449 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 NRP2O60462 931 aa12.21□□□□□ -0.45
BDNF-218ENST00000533246 DUSP11O75319 330 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms