RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 AKTIPQ9H8T0 292 aa15.3■□□□□ 0.04
CACNA1E-208ENST00000533229 COPS7BQ9H9Q2 264 aaPredicted RBP15.3■□□□□ 0.04
CACNA1E-208ENST00000533229 C6orf203Q9P0P8 240 aaPredicted RBP15.3■□□□□ 0.04
CACNA1E-208ENST00000533229 RIMS3Q9UJD0 308 aa15.3■□□□□ 0.04
CACNA1E-208ENST00000533229 CRTAMO95727 393 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 CD160O95971 181 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 CORO1AP31146 461 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 XIAPP98170 497 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 STX5Q13190 355 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 MMEL1Q495T6 779 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 PIANPQ8IYJ0 282 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 BBS5Q8N3I7 341 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 RHEBL1Q8TAI7 183 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 ZNF483Q8TF39 744 aaPredicted RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 GCNAQ96QF7 691 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 SLC30A3Q99726 388 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TUBB1Q9H4B7 451 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 POPDC3Q9HBV1 291 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 HMX1Q9NP08 348 aaPredicted RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 MID1IP1Q9NPA3 183 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TET1Q8NFU7 2136 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 PRORSD1PA6NEY8 169 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TRIM38O00635 465 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 SCAMP3O14828 347 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 CLDN11O75508 207 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 RHOBTB1O94844 696 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 EFEMP2O95967 443 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 SNRPB2P08579 225 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 IRF1P10914 325 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 HOXD10P28358 340 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 PSMD8P48556 350 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 RALGDSQ12967 914 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 NOGQ13253 232 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 MTA1Q13330 715 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 MED21Q13503 144 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 HECTD3Q5T447 861 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 LINGO4Q6UY18 593 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 LPCAT1Q8NF37 534 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TRPC4APQ8TEL6 797 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 SEPT8Q92599 483 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 BIRC8Q96P09 236 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 PKP2Q99959 881 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TMEM175Q9BSA9 504 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 TFB2MQ9H5Q4 396 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 INTS10Q9NVR2 710 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 MTRRQ9UBK8 725 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 SARDHQ9UL12 918 aa15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 AGO1Q9UL18 857 aaKnown RBP15.29■□□□□ 0.04
CACNA1E-208ENST00000533229 PRSS51A0A1B0GVH4 220 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 C2orf78A6NCI8 922 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 OR1I1O60431 355 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 CLASP2O75122 1294 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 RHOCP08134 193 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 FGF4P08620 206 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 HOXB8P17481 243 aaPredicted RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ARF5P84085 180 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 BFSP2Q13515 415 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TAF1AQ15573 450 aaPredicted RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 CXorf57Q6NSI4 855 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 PSAPL1Q6NUJ1 521 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 KIAA1191Q96A73 305 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ASB9Q96DX5 294 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 DCUN1D1Q96GG9 259 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 CDK5RAP1Q96SZ6 601 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 SLC39A3Q9BRY0 314 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 UNC93B1Q9H1C4 597 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 SCUBE2Q9NQ36 999 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 DTNAQ9Y4J8 743 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 MKI67P46013 3256 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ILVBLA1L0T0 632 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 CDC7O00311 574 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 PIP5K1BO14986 540 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TRIM24O15164 1050 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 SRP72O76094 671 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 GFAPP14136 432 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 GPX3P22352 226 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 NME5P56597 212 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 IRX1P78414 480 aaPredicted RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 FOLH1Q04609 750 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ZNF177Q13360 481 aaPredicted RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ADGRE1Q14246 886 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TRIM25Q14258 630 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 GRB7Q14451 532 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TSNQ15631 228 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ZFP1Q6P2D0 407 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TICAM1Q8IUC6 712 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 PHYKPLQ8IUZ5 450 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 ICA1LQ8NDH6 482 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 TWIST2Q8WVJ9 160 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 GPR21Q99679 349 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 CLSTN3Q9BQT9 956 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 PIDD1Q9HB75 910 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 BPIFA1Q9NP55 256 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 FNDC3AQ9Y2H6 1198 aaKnown RBP15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 RAI2Q9Y5P3 530 aa15.28■□□□□ 0.04
CACNA1E-208ENST00000533229 GPR39O43194 453 aa15.27■□□□□ 0.04
CACNA1E-208ENST00000533229 NRP2O60462 931 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms