RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 GNPDA1P46926 289 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 ILF3Q12906 894 aaKnown RBP eCLIP17.17■□□□□ 0.341e-6■□□□□ 9.4
PHRF1-204ENST00000532550 SPIDRQ14159 915 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 TAZQ16635 292 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 QPCTQ16769 361 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 CCDC70Q6NSX1 233 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 C11orf63Q6NUN7 778 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 ADAMTSL4Q6UY14 1074 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 B4GALNT4Q76KP1 1039 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 KDELC2Q7Z4H8 507 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 LSMEM2Q8N112 164 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 GPR156Q8NFN8 814 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 EXD1Q8NHP7 514 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 TFB1MQ8WVM0 346 aaKnown RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 P3H4Q92791 437 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 IMP4Q96G21 291 aaKnown RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 RIOK2Q9BVS4 552 aaKnown RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 GSDMCQ9BYG8 508 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 FRMD8Q9BZ67 464 aaPredicted RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 SYNDIG1Q9H7V2 258 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 TRNAU1APQ9NX07 287 aaKnown RBP17.17■□□□□ 0.34
PHRF1-204ENST00000532550 SUFUQ9UMX1 484 aa17.17■□□□□ 0.34
PHRF1-204ENST00000532550 FAM208BQ5VWN6 2430 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 FUCA1P04066 466 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 POLD2P49005 469 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 PEX6Q13608 980 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 FAM182AQ5T1J6 154 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 DOK6Q6PKX4 331 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 GAS2L3Q86XJ1 694 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 CCL4L1Q8NHW4 92 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 GPBAR1Q8TDU6 330 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 FGF11Q92914 225 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 CCDC74AQ96AQ1 378 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 RBM41Q96IZ5 413 aaKnown RBP17.16■□□□□ 0.34
PHRF1-204ENST00000532550 HIC2Q96JB3 615 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 DCBLD2Q96PD2 775 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 PKD2L2Q9NZM6 624 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 LHX6Q9UPM6 363 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 SLC17A4Q9Y2C5 497 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 TMEM98Q9Y2Y6 226 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 CELSR3Q9NYQ7 3312 aa17.16■□□□□ 0.34
PHRF1-204ENST00000532550 RGSL1A5PLK6 1076 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 B4DGG1 531 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 RRP8O43159 456 aaKnown RBP17.15■□□□□ 0.34
PHRF1-204ENST00000532550 MTSS1O43312 755 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 ASMTLO95671 621 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 MPOP05164 745 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 IVLP07476 585 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 GLB1P16278 677 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 LSSP48449 732 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 SPINT3P49223 89 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 GABREP78334 506 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 CDK18Q07002 472 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 GALNT3Q14435 633 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 PCSK7Q16549 785 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 LRRC69Q6ZNQ3 347 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 KIAA1524Q8TCG1 905 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 TEKT5Q96M29 485 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 AGAP2Q99490 1192 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 FAM83DQ9H4H8 585 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 POLR1BQ9H9Y6 1135 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 ZFYVE1Q9HBF4 777 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 SPATS2LQ9NUQ6 558 aaKnown RBP17.15■□□□□ 0.34
PHRF1-204ENST00000532550 ADAMTS20P59510 1910 aa17.15■□□□□ 0.34
PHRF1-204ENST00000532550 hCG_1818297A0A087WSY0 165 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 A0A087WV48 116 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 NOBOXO60393 691 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 SOD1P00441 154 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 PECAM1P16284 738 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-204ENST00000532550 FECHP22830 423 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 PTPN3P26045 913 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 CCL7P80098 99 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 CTBSQ01459 385 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 ADCY2Q08462 1091 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 PRKD1Q15139 912 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-204ENST00000532550 SLC14A2Q15849 920 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 C14orf28Q4W4Y0 310 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 ZC3H18Q86VM9 953 aaKnown RBP17.14■□□□□ 0.33
PHRF1-204ENST00000532550 NRROSQ86YC3 692 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 Q8N9G6 341 aaPredicted RBP17.14■□□□□ 0.33
PHRF1-204ENST00000532550 SPATA22Q8NHS9 363 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 ATXN7L3BQ96GX2 97 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 GFM1Q96RP9 751 aaKnown RBP17.14■□□□□ 0.33
PHRF1-204ENST00000532550 MAGEE1Q9HCI5 957 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 TAAR2Q9P1P5 351 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 LRIT1Q9P2V4 623 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 RABGEF1Q9UJ41 708 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 ENTPD2Q9Y5L3 495 aa17.14■□□□□ 0.33
PHRF1-204ENST00000532550 RCCD1A6NED2 376 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 NTN3O00634 580 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 INPP4BO15327 924 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 TLX3O43711 291 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 PMPCBO75439 489 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 MT-CYBP00156 380 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 FGF1P05230 155 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 RPLP0P05388 317 aaKnown RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 PNLIPP16233 465 aa17.13■□□□□ 0.33
PHRF1-204ENST00000532550 AK4P27144 223 aaPredicted RBP17.13■□□□□ 0.33
PHRF1-204ENST00000532550 ADCY8P40145 1251 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms