RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 PEX12O00623 359 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 ZNHIT1O43257 154 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 SYNGR3O43761 229 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 DPEP1P16444 411 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 MAOAP21397 527 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 MRPS5P82675 430 aaKnown RBP4.07□□□□□ -1.76
PTPRK-220ENST00000531466 NAA25Q14CX7 972 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FBXO46Q6PJ61 603 aaPredicted RBP4.07□□□□□ -1.76
PTPRK-220ENST00000531466 RAD9BQ6WBX8 426 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 SLC35F3Q8IY50 421 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 THAP4Q8WY91 577 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 POM121L2Q96KW2 1035 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 CABLES2Q9BTV7 478 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 ARNT2Q9HBZ2 717 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 MAGEE1Q9HCI5 957 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FGF22Q9HCT0 170 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 MMP25Q9NPA2 562 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 SNTG1Q9NSN8 517 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 ZDHHC18Q9NUE0 388 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 INTS10Q9NVR2 710 aaKnown RBP4.07□□□□□ -1.76
PTPRK-220ENST00000531466 CACNG5Q9UF02 275 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 FBXO9Q9UK97 447 aaPredicted RBP4.07□□□□□ -1.76
PTPRK-220ENST00000531466 MRPS28Q9Y2Q9 187 aaKnown RBP4.07□□□□□ -1.76
PTPRK-220ENST00000531466 TAF1P21675 1872 aa4.07□□□□□ -1.76
PTPRK-220ENST00000531466 PLEKHD1A6NEE1 506 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 TMEM202A6NGA9 273 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 SH2D7A6NKC9 451 aaPredicted RBP4.06□□□□□ -1.76
PTPRK-220ENST00000531466 H7C423 109 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 CAND2O75155 1236 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 ADD2P35612 726 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 MAP2K2P36507 400 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 ITGA9Q13797 1035 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 C2orf68Q2NKX9 166 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 GLIPR1L2Q4G1C9 344 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 HSP90AB4PQ58FF6 505 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 CCSAPQ6IQ19 270 aaPredicted RBP4.06□□□□□ -1.76
PTPRK-220ENST00000531466 TTI2Q6NXR4 508 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 LINGO2Q7L985 606 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 SPPL3Q8TCT6 385 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 SDCCAG3Q96C92 435 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 ZNF414Q96IQ9 312 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 BBS4Q96RK4 519 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 NEURL2Q9BR09 285 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 PPP1R3EQ9H7J1 279 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 GPR108Q9NPR9 543 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 RASAL2Q9UJF2 1139 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 ACSL5Q9ULC5 683 aa4.06□□□□□ -1.76
PTPRK-220ENST00000531466 TTC7AQ9ULT0 858 aaPredicted RBP4.06□□□□□ -1.76
PTPRK-220ENST00000531466 SH2B2O14492 632 aaPredicted RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 TK1P04183 234 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 MYL1P05976 194 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 SETSIPP0DME0 302 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 MCCP23508 829 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 SERPINB3P29508 390 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 HOXA13P31271 388 aaPredicted RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 AMPHP49418 695 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 RAD23BP54727 409 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 TBX4P57082 545 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 BLMHQ13867 455 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 VEPH1Q14D04 833 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 TECRLQ5HYJ1 363 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 TMED8Q6PL24 325 aaPredicted RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 EXOC8Q8IYI6 725 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 ZCCHC9Q8N567 271 aaKnown RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 TMEM57Q8N5G2 664 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 HMGCLL1Q8TB92 370 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 AFG1LQ8WV93 481 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 NDST4Q9H3R1 872 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 BICC1Q9H694 974 aaKnown RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 PEMTQ9UBM1 199 aa4.05□□□□□ -1.76
PTPRK-220ENST00000531466 RRP7AQ9Y3A4 280 aaKnown RBP4.05□□□□□ -1.76
PTPRK-220ENST00000531466 PRC1O43663 620 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 CTSVO60911 334 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 FAM155BO75949 473 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 PTMAP06454 111 aaKnown RBP4.04□□□□□ -1.76
PTPRK-220ENST00000531466 POLR2CP19387 275 aaPredicted RBP4.04□□□□□ -1.76
PTPRK-220ENST00000531466 METAP2P50579 478 aaKnown RBP eCLIP4.04□□□□□ -1.76
PTPRK-220ENST00000531466 TMEM35AQ53FP2 167 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 ZNF667Q5HYK9 610 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 DUS1LQ6P1R4 473 aaKnown RBP4.04□□□□□ -1.76
PTPRK-220ENST00000531466 SPATA6LQ8N4H0 392 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 ZBTB2Q8N680 514 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 SLC38A5Q8WUX1 472 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 ALKBH4Q9NXW9 302 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 POLG2Q9UHN1 485 aa4.04□□□□□ -1.76
PTPRK-220ENST00000531466 LSM4Q9Y4Z0 139 aaKnown RBP4.04□□□□□ -1.76
PTPRK-220ENST00000531466 PTPRCP08575 1304 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 CCDC194A0A1B0GVG4 234 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 TCERG1O14776 1098 aaKnown RBP4.03□□□□□ -1.76
PTPRK-220ENST00000531466 FAM106CPP0CH98 169 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 DDX5P17844 614 aaKnown RBP4.03□□□□□ -1.76
PTPRK-220ENST00000531466 ACTR2P61160 394 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 SPOCK1Q08629 439 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 TAF11Q15544 211 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 TCTN1Q2MV58 587 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 CCDC38Q502W7 563 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 ZC2HC1CQ53FD0 456 aaPredicted RBP4.03□□□□□ -1.76
PTPRK-220ENST00000531466 HIST2H2BDQ6DRA6 164 aa4.03□□□□□ -1.76
PTPRK-220ENST00000531466 DHX40Q8IX18 779 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms