RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 C17orf53Q8N3J3 647 aaPredicted RBP11.84□□□□□ -0.51
LTBP3-219ENST00000530990 PRELID2Q8N945 189 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 GLIS1Q8NBF1 620 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 ZNF548Q8NEK5 533 aaPredicted RBP11.84□□□□□ -0.51
LTBP3-219ENST00000530990 BLOC1S5Q8TDH9 187 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 WDR92Q96MX6 357 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 PPP1R2P1Q96PQ5 205 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 OSBPL9Q96SU4 736 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 AGAP2Q99490 1192 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 TBL1YQ9BQ87 522 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 RIOK2Q9BVS4 552 aaKnown RBP11.84□□□□□ -0.51
LTBP3-219ENST00000530990 TEX101Q9BY14 249 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 GPR63Q9BZJ6 419 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 FGF22Q9HCT0 170 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 KLQ9UEF7 1012 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 APOBEC3BQ9UH17 382 aaKnown RBP11.84□□□□□ -0.51
LTBP3-219ENST00000530990 SNX12Q9UMY4 172 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 ZKSCAN5Q9Y2L8 839 aa11.84□□□□□ -0.51
LTBP3-219ENST00000530990 SPAARA0A1B0GVQ0 90 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TMEM202A6NGA9 273 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 FADS2P1A8MWK0 482 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 PGRMC1O00264 195 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 SCAMP1O15126 338 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 ZNF185O15231 689 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 FFAR2O15552 330 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 ETS1P14921 441 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TEAD1P28347 426 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 GNG11P61952 73 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 HNRNPKP61978 463 aaKnown RBP eCLIP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 PPARDQ03181 441 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 KCTD19Q17RG1 926 aaPredicted RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 INAVAQ3KP66 663 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 HENMT1Q5T8I9 393 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 ALS2CLQ60I27 953 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 KCTD11Q693B1 232 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 RANBP10Q6VN20 620 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 GLT6D1Q7Z4J2 308 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TRIM74Q86UV6 250 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 RAVER1Q8IY67 606 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 SLC25A45Q8N413 288 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TTC30BQ8N4P2 665 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 EID2Q8N6I1 236 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 GPR26Q8NDV2 337 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 OR56A4Q8NGH8 313 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 RHBDD1Q8TEB9 315 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 OR1E3Q8WZA6 343 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TSACCQ96A04 125 aaPredicted RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 LRRC61Q9BV99 259 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 AP1M1Q9BXS5 423 aa11.83□□□□□ -0.52
LTBP3-219ENST00000530990 MRPL40Q9NQ50 206 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 PHPT1Q9NRX4 125 aaPredicted RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 TTC7AQ9ULT0 858 aaPredicted RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 CNOT1A5YKK6 2376 aaKnown RBP11.83□□□□□ -0.52
LTBP3-219ENST00000530990 FANCGO15287 622 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 INPP4BO15327 924 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 AQP9O43315 295 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 RASGRP1O95267 797 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 CELA2BP08218 269 aaPredicted RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 ZSCAN5DPP0CG00 497 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 GIMD1P0DJR0 217 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 BPIP17213 487 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 KELP23276 732 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 ACTN2P35609 894 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 KCNJ1P48048 391 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 HK3P52790 923 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 DCDC1P59894 354 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 SRP54P61011 504 aaKnown RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 TCEA2Q15560 299 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 PRRT3Q5FWE3 981 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 DENND5AQ6IQ26 1287 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 TTC27Q6P3X3 843 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 ADAMTSL4Q6UY14 1074 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 RD3Q7Z3Z2 195 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 HID1Q8IV36 788 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 PDCD7Q8N8D1 485 aaKnown RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 CCDC89Q8N998 374 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 ATL2Q8NHH9 583 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 LMX1AQ8TE12 382 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 PTCD2Q8WV60 388 aaKnown RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 SRPK1Q96SB4 655 aaKnown RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 FRMD8Q9BZ67 464 aaPredicted RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 FAM83DQ9H4H8 585 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 TRABDQ9H4I3 376 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 LRRC40Q9H9A6 602 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 BPIFA1Q9NP55 256 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 HACD3Q9P035 362 aa11.82□□□□□ -0.52
LTBP3-219ENST00000530990 NFKBIL1Q9UBC1 381 aaPredicted RBP11.82□□□□□ -0.52
LTBP3-219ENST00000530990 PRSS38A1L453 326 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 RGSL1A5PLK6 1076 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 TRIM38O00635 465 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 CES2O00748 559 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 BUD23O43709 281 aaKnown RBP11.81□□□□□ -0.52
LTBP3-219ENST00000530990 AP2A1O95782 977 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 PYGLP06737 847 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 TCP1P17987 556 aaKnown RBP11.81□□□□□ -0.52
LTBP3-219ENST00000530990 RPL22P35268 128 aaKnown RBP11.81□□□□□ -0.52
LTBP3-219ENST00000530990 HMGCLP35914 325 aa11.81□□□□□ -0.52
LTBP3-219ENST00000530990 FDFT1P37268 417 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms