RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 MVKQ03426 396 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CYP24A1Q07973 514 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 IL18R1Q13478 541 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LINC00518Q8N0U6 118 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 FAM83FQ8NEG4 500 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LRRC20Q8TCA0 184 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SGCDQ92629 289 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SNAPC3Q92966 411 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PMEPA1Q969W9 287 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ACSF2Q96CM8 615 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ZFYVE19Q96K21 471 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 FAM84AQ96KN4 292 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 NIPAL2Q9H841 368 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 GLTPQ9NZD2 209 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC59Q9P031 241 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 BOLA1Q9Y3E2 137 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PCDHGB2Q9Y5G2 931 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 KLF2Q9Y5W3 355 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LOC285556D6RIA3 1793 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CCDC154A6NI56 674 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PI15O43692 258 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CABYRO75952 493 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LDLRP01130 860 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TYK2P29597 1187 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 GP5P40197 560 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MLLT3P42568 568 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PRELPP51888 382 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SLC7A2P52569 658 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ARSFP54793 590 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 EMX1Q04741 257 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 DAG1Q14118 895 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PSMD5Q16401 504 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ARL13AQ5H913 290 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CLVS2Q5SYC1 327 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 GATAD2AQ86YP4 633 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 RFX6Q8HWS3 928 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 CARNMT1Q8N4J0 409 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TAB3Q8N5C8 712 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PARP16Q8N5Y8 322 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 KDM1BQ8NB78 822 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 BPIFB1Q8TDL5 484 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 HERVK_113Q902F9 699 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PI4K2AQ9BTU6 479 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 BDH2Q9BUT1 245 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 DGCR6LQ9BY27 220 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 IFT22Q9H7X7 185 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 IGSF5Q9NSI5 407 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TAS2R7Q9NYW3 318 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 USE1Q9NZ43 259 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SEPT9Q9UHD8 586 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 AURKCQ9UQB9 309 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ZFC3H1O60293 1989 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TRIP11Q15643 1979 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LCTP09848 1927 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LOC110117498-PIK3R3F6TDL0 507 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TOR1AO14656 332 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 NPHS1O60500 1241 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 ZNF623O75123 536 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TRIM3O75382 744 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SOAT2O75908 522 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PIGNO95427 931 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 C4BPAP04003 597 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 THRBP10828 461 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 DBTP11182 482 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TFE3P19532 575 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 LRPAP1P30533 357 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 RYKP34925 604 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SEPHS1P49903 392 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 RIN1Q13671 783 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 FASTKQ14296 549 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TBRG1Q3YBR2 411 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 COQ5Q5HYK3 327 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 PPM1JQ5JR12 505 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 DPP8Q6V1X1 898 aaPredicted RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 HID1Q8IV36 788 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MAP4K3Q8IVH8 894 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 NLGN4XQ8N0W4 816 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MPP5Q8N3R9 675 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TMEM199Q8N511 208 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 SLC7A6Q92536 515 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 RPL3LQ92901 407 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 HEXIM2Q96MH2 286 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 APOL4Q9BPW4 351 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TTYH2Q9BSA4 534 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 NAT9Q9BTE0 207 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 MEAF6Q9HAF1 191 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 TAS2R9Q9NYW1 312 aa8.12□□□□□ -1.11
CSDE1-214ENST00000530886 INTS6Q9UL03 887 aaKnown RBP8.12□□□□□ -1.11
CSDE1-214ENST00000530886 A0A0G2JMZ2 1700 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 LRRC37A2A6NM11 1700 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 H0YC42 278 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 SLC1A7O00341 560 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 NME4O00746 187 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 KATNA1O75449 491 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 B3GALNT1O75752 331 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 CD4P01730 458 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 JUNDP17535 347 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 TGM2P21980 687 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 DNAJB2P25686 324 aa8.11□□□□□ -1.11
CSDE1-214ENST00000530886 OXTRP30559 389 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms