RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 ZIM3Q96PE6 472 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 NAT9Q9BTE0 207 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 FZD3Q9NPG1 666 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 CTNNAL1Q9UBT7 734 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 RABGEF1Q9UJ41 708 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 NCKAP1Q9Y2A7 1128 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 PSAT1Q9Y617 370 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 FAM169AQ9Y6X4 670 aa10.63□□□□□ -0.71
SOX6-213ENST00000530378 CEP192Q8TEP8 1941 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3DA0A087WVF3 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3IA0A087WXS9 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3EA0A087X179 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3KA0A087X1G2 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3FA6NER0 549 aaPredicted RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3LB9A6J9 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 GAPDHSO14556 408 aaPredicted RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 PLRG1O43660 514 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 RNGTTO60942 597 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 ALDH1A2O94788 518 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 APBB3O95704 486 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3HP0C7X1 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 PAMP19021 973 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 AOC1P19801 751 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 NFKBIAP25963 317 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 STX2P32856 288 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 ARCN1P48444 511 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 SPINT3P49223 89 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 CTBP1Q13363 440 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 PEX6Q13608 980 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 THOC5Q13769 683 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 CHRNA6Q15825 494 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3GQ6DHY5 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3CQ6IPX1 549 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 PSAPL1Q6NUJ1 521 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 NLRP9Q7RTR0 991 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 CCNJLQ8IV13 435 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 TBC1D3Q8IZP1 549 aaPredicted RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 DEFB119Q8N690 84 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 CCDC97Q96F63 343 aaPredicted RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 RIOK2Q9BVS4 552 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 ACSS3Q9H6R3 686 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 PKD2L2Q9NZM6 624 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 DLGAP2Q9P1A6 1054 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 ZFATQ9P243 1243 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 ZFR2Q9UPR6 939 aaKnown RBP10.62□□□□□ -0.71
SOX6-213ENST00000530378 DMDP11532 3685 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 PIKFYVEQ9Y2I7 2098 aa10.62□□□□□ -0.71
SOX6-213ENST00000530378 GLYATL1P3A0A0U1RQE8 302 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TLDC2A0PJX2 215 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 FOXO6A8MYZ6 492 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 K7ESM1 405 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 RECQL5O94762 991 aaPredicted RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 PAPSS2O95340 614 aaPredicted RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 C1QAP02745 245 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ABHD2P08910 425 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ZNF30P17039 623 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A6P19224 532 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A1P22309 533 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A4P22310 534 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A3P35503 534 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 UGT1A5P35504 534 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 SPAM1P38567 509 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 SLC1A2P43004 574 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 CXCL12P48061 93 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ZBTB16Q05516 673 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 MGAT5Q09328 741 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 PDPK2PQ6A1A2 396 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TAS2R42Q7RTR8 314 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 HDXQ7Z353 690 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 SPNS2Q8IVW8 549 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 PIANPQ8IYJ0 282 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TMEM105Q8N8V8 129 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 RAB7BQ96AH8 199 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 NUS1Q96E22 293 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TOE1Q96GM8 510 aaKnown RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 PAFAH2Q99487 392 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 SPATA16Q9BXB7 569 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 FUT8Q9BYC5 575 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 CENPHQ9H3R5 247 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 EPHX3Q9H6B9 360 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 IL26Q9NPH9 171 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 FBXO6Q9NRD1 293 aaPredicted RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 CATSPERZQ9NTU4 200 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 MOCS1Q9NZB8 636 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TBK1Q9UHD2 729 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 CD3EAPO15446 510 aaKnown RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 SPAG6O75602 509 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 PCCBP05166 539 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 XIAPP98170 497 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 PDE1BQ01064 536 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ACVR1Q04771 509 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ZNF844Q08AG5 666 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 LAMB3Q13751 1172 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 BMPR2Q13873 1038 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 TMEM52BQ4KMG9 183 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ZNF789Q5FWF6 425 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 CEP85LQ5SZL2 805 aa10.61□□□□□ -0.71
SOX6-213ENST00000530378 ZNF648Q5T619 568 aaPredicted RBP10.61□□□□□ -0.71
SOX6-213ENST00000530378 NEPROQ6NW34 567 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms