RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 DDX43Q9NXZ2 648 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 PLK2Q9NYY3 685 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.05□□□□□ -1.76
CTR9-205ENST00000529898 HACD3Q9P035 362 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 ZNF624Q9P2J8 865 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 ZNF70Q9UC06 446 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 NUP50Q9UKX7 468 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PADI4Q9UM07 663 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 PCDHA12Q9UN75 941 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CHTOPQ9Y3Y2 248 aaKnown RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 MAGED1Q9Y5V3 778 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 ALKQ9UM73 1620 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 DLC1Q96QB1 1528 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CDK12Q9NYV4 1490 aaPredicted RBP4.05□□□□□ -1.76
CTR9-205ENST00000529898 MLH3Q9UHC1 1453 aa4.05□□□□□ -1.76
CTR9-205ENST00000529898 CPDO75976 1380 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZNF335Q9H4Z2 1342 aaPredicted RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 FAM237AA0A1B0GTK4 181 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 FUOMA2VDF0 154 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 OR5K3A6NET4 321 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TRPC5OSA6NMA1 111 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 hCG_1984214I3L0E3 225 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 AGPSO00116 658 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SGK1O00141 431 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CACNB4O00305 520 aaPredicted RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 RTCAO00442 366 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 BTN3A1O00481 513 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SLC9A3R1O14745 358 aaPredicted RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 PPM1DO15297 605 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SLC16A3O15427 465 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 SLC7A4O43246 635 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 NCK2O43639 380 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SCO2O43819 266 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TLR5O60602 858 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 PFKFB2O60825 505 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 VPS4BO75351 444 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 JTBO76095 146 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CSPG5O95196 566 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 OPN1MWP04001 364 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 HRGP04196 525 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 S100A9P06702 114 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 IFIT2P09913 472 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 ATXN1LP0C7T5 689 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 OPN1MW2P0DN77 364 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 OPN1MW3P0DN78 364 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ITGA2P17301 1181 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GSTM2P28161 218 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SERPINB3P29508 390 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 KRT2P35908 639 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 VHLP40337 213 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TMPOP42166 694 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 MAGEA11P43364 429 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 PPM1FP49593 454 aaPredicted RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 IST1P53990 364 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 P2RX3P56373 397 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 HAND2P61296 217 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GSTO1P78417 241 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 EXOSC10Q01780 885 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 COASYQ13057 564 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 NCF4Q15080 339 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 C5orf22Q49AR2 442 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZC2HC1CQ53FD0 456 aaPredicted RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 FBXO48Q5FWF7 155 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TCTE1Q5JU00 501 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 C6orf183Q5T699 404 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 LCE1AQ5T7P2 110 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 INTS11Q5TA45 600 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 TPGS2Q68CL5 300 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 FAM180BQ6P0A1 224 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TMEM108Q6UXF1 575 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 MFSD6Q6ZSS7 791 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 PIK3AP1Q6ZUJ8 805 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CCDC149Q6ZUS6 474 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GPR142Q7Z601 462 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GPR141Q7Z602 305 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 COMTD1Q86VU5 262 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 DNAAF5Q86Y56 855 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GATAD2AQ86YP4 633 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CAMK1DQ8IU85 385 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 TICAM1Q8IUC6 712 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CCDC28AQ8IWP9 274 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 SYTL1Q8IYJ3 562 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 CNTROBQ8N137 903 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 MAGEB6Q8N7X4 407 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 FAM133AQ8N9E0 248 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 EIF1ADQ8N9N8 165 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 SLC4A11Q8NBS3 891 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 FAM46DQ8NEK8 389 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZNF680Q8NEM1 530 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 LHFPL5Q8TAF8 219 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GANCQ8TET4 914 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 GRK7Q8WTQ7 553 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 RAPGEF4Q8WZA2 1011 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ERLEC1Q96DZ1 483 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZC3H10Q96K80 434 aaKnown RBP4.04□□□□□ -1.76
CTR9-205ENST00000529898 C7orf34Q96L11 122 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZNF778Q96MU6 729 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 AIFM3Q96NN9 605 aa4.04□□□□□ -1.76
CTR9-205ENST00000529898 ZPBPQ9BS86 351 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms