RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 CRYMQ14894 314 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KYNUQ16719 465 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZNF284Q2VY69 593 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 USP39Q53GS9 565 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 STEAP4Q687X5 459 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KIAA1161Q6NSJ0 714 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CAPN12Q6ZSI9 719 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CEP128Q6ZU80 1094 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 WDR5BQ86VZ2 330 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 HORMAD1Q86X24 394 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 UNC5BQ8IZJ1 945 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KLK6Q92876 244 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TBATAQ96M53 351 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 C1QTNF2Q9BXJ5 285 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CDC42EP4Q9H3Q1 356 aaKnown RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SEMA4AQ9H3S1 761 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SUDS3Q9H7L9 328 aaPredicted RBP12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NINJ2Q9NZG7 142 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CD84Q9UIB8 345 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FKBPLQ9UIM3 349 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PKP3Q9Y446 797 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 R4GN57 208 aa12.13□□□□□ -0.47
TRAF3IP2-211ENST00000528599 DMXL1Q9Y485 3027 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 WNT9AO14904 365 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RPP40O75818 363 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TM7SF2O76062 418 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 USP1O94782 785 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 POLBP06746 335 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 BCKDHBP21953 392 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ARNTP27540 789 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SSTR1P30872 391 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PTPN5P54829 565 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SLMAPQ14BN4 828 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SMAD1Q15797 465 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ALS2CLQ60I27 953 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 EMBQ6PCB8 327 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LONP2Q86WA8 852 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TRIM69Q86WT6 500 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CCNJLQ8IV13 435 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PALM2Q8IXS6 379 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZBTB44Q8NCP5 570 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PEX13Q92968 403 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SCAMP4Q969E2 229 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 HDAC10Q969S8 669 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 DTD2Q96FN9 168 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CDKN2AIPNLQ96HQ2 116 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PRRX2Q99811 253 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 C19orf43Q9BQ61 176 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ABCG8Q9H221 673 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 IL26Q9NPH9 171 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PKD2L2Q9NZM6 624 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 IL1RAPL1Q9NZN1 696 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FNDC3AQ9Y2H6 1198 aaKnown RBP12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FAM169AQ9Y6X4 670 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZFHX2Q9C0A1 2572 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CCDC162PA2VCL2 907 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RGSL1A5PLK6 1076 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 OR51F1A6NGY5 319 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GAPDHSO14556 408 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 VAPBO95292 243 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TTC4O95801 387 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PAK4O96013 591 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 IGHV4-34P06331 123 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ARCN1P48444 511 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PMS2P54278 862 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 XIAPP98170 497 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SRSF5Q13243 272 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PEX6Q13608 980 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 AGERQ15109 404 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ZNF528Q3MIS6 628 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SPANXN3Q5MJ09 141 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KIAA0895LQ68EN5 471 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 KIAA0930Q6ICG6 404 aaPredicted RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TRMT10BQ6PF06 316 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CYP2U1Q7Z449 544 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RAVER1Q8IY67 606 aaKnown RBP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NRSN1Q8IZ57 195 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PELI3Q8N2H9 469 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CAVIN3Q969G5 261 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SLC17A9Q9BYT1 436 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 ACBD3Q9H3P7 528 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FAM83DQ9H4H8 585 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 EBF2Q9HAK2 575 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 PLXND1Q9Y4D7 1925 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 TRPM6Q9BX84 2022 aa12.11□□□□□ -0.47
TRAF3IP2-211ENST00000528599 DOCK9Q9BZ29 2069 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 H7C0S8 307 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 RAD51BO15315 384 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SLC31A1O15431 190 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 GPR39O43194 453 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 LATO43561 262 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 NDUFS2O75306 463 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 FSBPO95073 299 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 CA5AP35218 305 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 SPAM1P38567 509 aa12.1□□□□□ -0.47
TRAF3IP2-211ENST00000528599 HADHAP40939 763 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms