RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 GSDMCQ9BYG8 508 aa15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 CBX8Q9HC52 389 aa15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 TRNAU1APQ9NX07 287 aaKnown RBP15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 SLC17A4Q9Y2C5 497 aa15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 PPIL1Q9Y3C6 166 aa15.49■□□□□ 0.07
CLNS1A-210ENST00000528364 SETXQ7Z333 2677 aaKnown RBP15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 RHPN2P1A8MT19 583 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 C9orf172C9J069 976 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 MFSD11O43934 449 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 FZD6O60353 706 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 CD1CP29017 333 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 GJC1P36383 396 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 GPR1P46091 355 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 DSC2Q02487 901 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 LINC00303Q3SY05 128 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 LRRC66Q68CR7 880 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 MARK2Q7KZI7 788 aaKnown RBP15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 PIM3Q86V86 326 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 NAGSQ8N159 534 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 RCBTB1Q8NDN9 531 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 KIAA1524Q8TCG1 905 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 CHKBQ9Y259 395 aa15.48■□□□□ 0.07
CLNS1A-210ENST00000528364 MYO1FO00160 1098 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 PSMD11O00231 422 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 PRLP01236 227 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 SERPING1P05155 500 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 IVLP07476 585 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 WT1P19544 449 aaPredicted RBP15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 MPSTP25325 297 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 SERPINB6P35237 376 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 NIPAL4Q0D2K0 466 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 DPYSL3Q14195 570 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 MAP9Q49MG5 647 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 RALGPS1Q5JS13 557 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 CCDC122Q5T0U0 273 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 NCBP2-AS2Q69YL0 99 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 USP45Q70EL2 814 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 ZNF438Q7Z4V0 828 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 FAM71BQ8TC56 605 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 JPH3Q8WXH2 748 aaPredicted RBP15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 SYN2Q92777 582 aaPredicted RBP15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 AP2M1Q96CW1 435 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 MED8Q96G25 268 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 CMKLR1Q99788 373 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 RBM22Q9NW64 420 aaKnown RBP eCLIP15.47■□□□□ 0.071e-6■■■□□ 15.6
CLNS1A-210ENST00000528364 KCTD5Q9NXV2 234 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 ACSL6Q9UKU0 697 aa15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 PCYT1BQ9Y5K3 369 aaPredicted RBP15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 BZW2Q9Y6E2 419 aaKnown RBP15.47■□□□□ 0.07
CLNS1A-210ENST00000528364 IGHV5-10-1A0A0J9YXX1 117 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 A0A0J9YYE9 177 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 A0A1W2PQJ5 194 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 INPP4BO15327 924 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 CLDN7O95471 211 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 CPNE6O95741 557 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 TRBC1P01850 177 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 TEAD1P28347 426 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 GARSP41250 739 aaKnown RBP15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ACTR1BP42025 376 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 UBASH3AP57075 661 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 TAS2R40P59535 323 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ACTR1AP61163 376 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 DPTQ07507 201 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 GALNT2Q10471 571 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ANKRD20A8PQ5CZ79 823 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ALKBH5Q6P6C2 394 aaKnown RBP15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ZNF761Q86XN6 746 aaPredicted RBP15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 ARRDC2Q8TBH0 407 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 PMEPA1Q969W9 287 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 SCARF2Q96GP6 870 aaPredicted RBP15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 RIOK2Q9BVS4 552 aaKnown RBP15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 TMEM9Q9P0T7 183 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 CAPN11Q9UMQ6 739 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 PRKAB1Q9Y478 270 aa15.46■□□□□ 0.07
CLNS1A-210ENST00000528364 SYCE3A1L190 88 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 B8ZZF3 427 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 J3QKU1 62 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 MATN3O15232 486 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 EML2O95834 649 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 LIPCP11150 499 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 FGF3P11487 239 aaPredicted RBP15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 NFKBIAP25963 317 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 EPHB1P54762 984 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 CYP4F2P78329 520 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 ZBED6P86452 979 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 SLC10A2Q12908 348 aaPredicted RBP15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 BIRC2Q13490 618 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 NR1D2Q14995 579 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 PAFAH1B3Q15102 231 aaKnown RBP15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 PYCR3Q53H96 274 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 ADAMTSL4Q6UY14 1074 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 LRRC49Q8IUZ0 686 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 PQLC3Q8N755 202 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 KCTD6Q8NC69 237 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 MAML1Q92585 1016 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 EXTL1Q92935 676 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 TMEM159Q96B96 161 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 SGF29Q96ES7 293 aa15.45■□□□□ 0.06
CLNS1A-210ENST00000528364 CCDC74BQ96LY2 380 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms