RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 AAR2Q9Y312 384 aaKnown RBP11.57□□□□□ -0.56
CCDC90B-210ENST00000528149 FADS3Q9Y5Q0 445 aa11.57□□□□□ -0.56
CCDC90B-210ENST00000528149 SNX11Q9Y5W9 270 aa11.57□□□□□ -0.56
CCDC90B-210ENST00000528149 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3DA0A087WVF3 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3IA0A087WXS9 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3EA0A087X179 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3KA0A087X1G2 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 A0A1W2PQU0 124 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 CTAGE15A4D2H0 777 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3FA6NER0 549 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 NPIPB15A6NHN6 443 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3LB9A6J9 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 E7EVH7 732 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 NEMP1O14524 444 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 AREL1O15033 823 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 UBR5O95071 2799 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 PCDH8O95206 1070 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 WISP1O95388 367 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 AP2A1O95782 977 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 SLC4A1P02730 911 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 APRTP07741 180 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3HP0C7X1 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 CTAGE8P0CG41 777 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 OXTRP30559 389 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 ADRA1AP35348 466 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TNNT3P45378 269 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 GRIA4P48058 902 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 NOTCH2Q04721 2471 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 RALGDSQ12967 914 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 DHX34Q14147 1143 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 SLC1A5Q15758 541 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 SMAD1Q15797 465 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 ANKRD22Q5VYY1 191 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3GQ6DHY5 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3CQ6IPX1 549 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 USP45Q70EL2 814 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TSPAN33Q86UF1 283 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 CTAGE6Q86UF2 777 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 CTAGE4Q8IX94 777 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TBC1D3Q8IZP1 549 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 NOA1Q8NC60 698 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 MNS1Q8NEH6 495 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 OR2T34Q8NGX1 318 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 HCAR2Q8TDS4 363 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 SPOCK2Q92563 424 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 NXPE2Q96DL1 559 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 PPP1R2P1Q96PQ5 205 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 ADGRE3Q9BY15 652 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TRIM31Q9BZY9 425 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 LRRC40Q9H9A6 602 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 SGK2Q9HBY8 427 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 PIH1D1Q9NWS0 290 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 B4GALT6Q9UBX8 382 aa11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 FEZ2Q9UHY8 353 aaPredicted RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 FNDC3AQ9Y2H6 1198 aaKnown RBP11.56□□□□□ -0.56
CCDC90B-210ENST00000528149 TDRD6O60522 2096 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 LRP4O75096 1905 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 A0A0J9YYE9 177 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 LOC285095A0A1B0GVY8 99 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 A0A1W2PQ67 120 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 TCRBV7S3A2A0A539 114 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 LRRC72A6NJI9 287 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 ERVH48-1M5A8F1 160 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 RIOK3O14730 519 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 SLC31A1O15431 190 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 AP1G1O43747 822 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 TMEM63AO94886 807 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 TRBC1P01850 177 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 FGF1P05230 155 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 HLA-DPA1P20036 260 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 LHCGRP22888 699 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 VIPR1P32241 457 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 RPL26P61254 145 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 POLR2LP62875 67 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CCDC15Q0P6D6 951 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 ELP6Q0PNE2 266 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 KCNJ11Q14654 390 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CNGA3Q16281 694 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 ZNF284Q2VY69 593 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 TAF1BQ53T94 588 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CCDC157Q569K6 752 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 C8orf74Q6P047 294 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 ERAP2Q6P179 960 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 C4orf22Q6V702 233 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 PPP1R21Q6ZMI0 780 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 SYDE1Q6ZW31 735 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 MICALCLQ6ZW33 695 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 DPPA4Q7L190 304 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CEP112Q8N8E3 955 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CADM4Q8NFZ8 388 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 CPT1BQ92523 772 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 RAB7BQ96AH8 199 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 MCCC1Q96RQ3 725 aaPredicted RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 ZDHHC5Q9C0B5 715 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 PREBQ9HCU5 417 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 SUSD2Q9UGT4 822 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 RPL26L1Q9UNX3 145 aaKnown RBP11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
CCDC90B-210ENST00000528149 NBPF19A0A087WUL8 3843 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms