RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 RABEPKQ7Z6M1 372 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 SLC25A41Q8N5S1 370 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 ACTRT1Q8TDG2 376 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 FAM131CQ96AQ9 280 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 SLC6A18Q96N87 628 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 MLPHQ9BV36 600 aaPredicted RBP11.03□□□□□ -0.64
CCDC84-205ENST00000528088 NUSAP1Q9BXS6 441 aaKnown RBP11.03□□□□□ -0.64
CCDC84-205ENST00000528088 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 USP29Q9HBJ7 922 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 COQ6Q9Y2Z9 468 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 AAR2Q9Y312 384 aaKnown RBP11.03□□□□□ -0.64
CCDC84-205ENST00000528088 KCNMB2Q9Y691 235 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 CACNA1EQ15878 2313 aa11.03□□□□□ -0.64
CCDC84-205ENST00000528088 A0A1B0GTW7 788 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 PHF2O75151 1096 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 NDST3O95803 873 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 PAK4O96013 591 aaPredicted RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 C6P13671 934 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 GRNP28799 593 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 NUDT1P36639 197 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 LIG3P49916 1009 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 NOVA1P51513 510 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 ARSDP51689 593 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 ATXN3P54252 364 aaPredicted RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 TERF1P54274 439 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 WNT3AP56704 352 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 C21orf59P57076 290 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 RPL26P61254 145 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 STAT4Q14765 748 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 XKR5Q6UX68 686 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 PRELID2Q8N945 189 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 CEP76Q8TAP6 659 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 VOPP1Q96AW1 172 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 SKA1Q96BD8 255 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 OXNAD1Q96HP4 312 aaPredicted RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 FICDQ9BVA6 458 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 GTPBP2Q9BX10 602 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 SLC17A9Q9BYT1 436 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 SLC6A14Q9UN76 642 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 RPL26L1Q9UNX3 145 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 ZFR2Q9UPR6 939 aaKnown RBP11.02□□□□□ -0.65
CCDC84-205ENST00000528088 DMTF1Q9Y222 760 aa11.02□□□□□ -0.65
CCDC84-205ENST00000528088 A0A0J9YYE9 177 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 C1orf232A0A0U1RR37 186 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 CAPN8A6NHC0 703 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 NPIPB15A6NHN6 443 aaPredicted RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 ANKRD66B4E2M5 251 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PRAMEF26H0Y7S4 382 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 LATO43561 262 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 GCATO75600 419 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 TRBC1P01850 177 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PIRTP0C851 137 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 BMP2P12643 396 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 ETS1P14921 441 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 HNRNPA2B1P22626 353 aaKnown RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 HOXD12P35452 270 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 HNF1BP35680 557 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 VPS41P49754 854 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 AFF3P51826 1226 aaKnown RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 BASP1P80723 227 aaKnown RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 SLC14A2Q15849 920 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PARP6Q2NL67 630 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 ZNF284Q2VY69 593 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 TMEM52BQ4KMG9 183 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 NAPEPLDQ6IQ20 393 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 CCDC137Q6PK04 289 aaKnown RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 LAYNQ6UX15 382 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 LRRC69Q6ZNQ3 347 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PTAR1Q7Z6K3 402 aaPredicted RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PRUNE1Q86TP1 453 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 DEFB124Q8NES8 71 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 CCHCR1Q8TD31 782 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PIH1D2Q8WWB5 315 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 DNASE2BQ8WZ79 361 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 SCRN2Q96FV2 425 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 SMIM14Q96QK8 99 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 APOL2Q9BQE5 337 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 GPR63Q9BZJ6 419 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 TM9SF3Q9HD45 589 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PAK5Q9P286 719 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 TTC7AQ9ULT0 858 aaPredicted RBP11.01□□□□□ -0.65
CCDC84-205ENST00000528088 ACACBO00763 2458 aa11.01□□□□□ -0.65
CCDC84-205ENST00000528088 PCDH15Q96QU1 1955 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 FPGTO14772 594 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 HEXIM1O94992 359 aaKnown RBP11□□□□□ -0.65
CCDC84-205ENST00000528088 METTL18O95568 372 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 TOP3BO95985 862 aaKnown RBP11□□□□□ -0.65
CCDC84-205ENST00000528088 GAS8O95995 478 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 PCCBP05166 539 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 ZSCAN5DPP0CG00 497 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 HLA-DPA1P20036 260 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 CD38P28907 300 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 PMLP29590 882 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 FDFT1P37268 417 aa11□□□□□ -0.65
CCDC84-205ENST00000528088 COILP38432 576 aaPredicted RBP11□□□□□ -0.65
CCDC84-205ENST00000528088 CSNK1EP49674 416 aaKnown RBP11□□□□□ -0.65
CCDC84-205ENST00000528088 CLDN2P57739 230 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms