RNA–Protein interactions for RNA: ENST00000526991.2

CHMP1B-201, Transcript of charged multivesicular body protein 1B, humanhuman

APPRIS P1 BASIC

Gene CHMP1B, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-201ENST00000526991 TRPC4APQ8TEL6 797 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 SLC25A51Q9H1U9 297 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 NOL11Q9H8H0 719 aaKnown RBP11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 COQ10BQ9H8M1 238 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 MID1IP1Q9NPA3 183 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 DDX18Q9NVP1 670 aaKnown RBP11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 CACNA2D2Q9NY47 1150 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 MARCH2Q9P0N8 246 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 C6orf203Q9P0P8 240 aaPredicted RBP11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 TIMM22Q9Y584 194 aa11.96□□□□□ -0.49
CHMP1B-201ENST00000526991 A0A0D9SEW6 157 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 SLCO1B7G3V0H7 640 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 ACOT8O14734 319 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 PEX11BO96011 259 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 MMP2P08253 660 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 COL6A2P12110 1019 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 OR1E1P30953 314 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 FRG1Q14331 258 aaKnown RBP11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 GRB7Q14451 532 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 PLA2G4EQ3MJ16 856 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 TIGD7Q6NT04 549 aaPredicted RBP11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 CCDC80Q76M96 950 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 SLC43A3Q8NBI5 491 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 CCDC28BQ9BUN5 200 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 ATP11BQ9Y2G3 1177 aa11.96□□□□□ -0.5
CHMP1B-201ENST00000526991 MTMR11A4FU01 709 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 AP3B1O00203 1094 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 BCAS2O75934 225 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 S1PR4O95977 384 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CLPTM1O96005 669 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 GOT2P00505 430 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 MT-ND1P03886 318 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 GFAPP14136 432 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CST5P28325 142 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 RPS24P62847 133 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SH3BP2P78314 561 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 MYBPC1Q00872 1141 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 PLIN5Q00G26 463 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 POLD3Q15054 466 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 ISCA2Q86U28 154 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 LZTR1Q8N653 840 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 IMP4Q96G21 291 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CASD1Q96PB1 797 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 PHF12Q96QT6 1004 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 HBEGFQ99075 208 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 GSTO2Q9H4Y5 243 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SEMA4BQ9NPR2 832 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 PRDM5Q9NQX1 630 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 VCANP13611 3396 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CCDC162PA2VCL2 907 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SAC3D1A6NKF1 404 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 H3BMM5 538 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CASQ2O14958 399 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 GPR39O43194 453 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 NPHS1O60500 1241 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 TLR5O60602 858 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 VNN2O95498 520 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 ALDOCP09972 364 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 FMO4P31512 558 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 GRIA3P42263 894 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CDKN1CP49918 316 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 PFKPQ01813 784 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 MAPRE1Q15691 268 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CCDC92Q53HC0 331 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 ZNF549Q6P9A3 640 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CYHR1Q6ZMK1 362 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 DCP1BQ8IZD4 617 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SLC29A1Q99808 456 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 ZYG11BQ9C0D3 744 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 HIPK3Q9H422 1215 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 AASDHPPTQ9NRN7 309 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 AP4S1Q9Y587 144 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SPO11Q9Y5K1 396 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SLC4A7Q9Y6M7 1214 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 CHD9Q3L8U1 2897 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 MYO16Q9Y6X6 1858 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 C7orf72A4D263 438 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 TRIM38O00635 465 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SNRPB2P08579 225 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SMIM18P0DKX4 95 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 APLP1P51693 650 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 INHBCP55103 352 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 EIF4EBP2Q13542 120 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 OR4D1Q15615 310 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 FXNQ16595 210 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 FUT11Q495W5 492 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 NADK2Q4G0N4 442 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 METTL25Q8N6Q8 603 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 ST13P5Q8NFI4 369 aaPredicted RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 NUDT8Q8WV74 236 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SERPINB11Q96P15 392 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 AKTIPQ9H8T0 292 aa11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 SARS2Q9NP81 518 aaKnown RBP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.95□□□□□ -0.5
CHMP1B-201ENST00000526991 MYLKQ15746 1914 aa11.94□□□□□ -0.5
CHMP1B-201ENST00000526991 THSD7BQ9C0I4 1608 aa11.94□□□□□ -0.5
CHMP1B-201ENST00000526991 MOXD2PA6NHM9 499 aa11.94□□□□□ -0.5
CHMP1B-201ENST00000526991 RAMP2O60895 175 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms