RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 LMBRD1Q9NUN5 540 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 SLC39A1Q9NY26 324 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 CD84Q9UIB8 345 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 TMEM98Q9Y2Y6 226 aa23.87■■□□□ 1.41
USP47-205ENST00000525257 ZFC3H1O60293 1989 aaKnown RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 LRRC10BA6NIK2 292 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 H3BRJ5 948 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 AMPD1P23109 780 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 TEAD1P28347 426 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 GPR1P46091 355 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 PPM1FP49593 454 aaPredicted RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 TLE1Q04724 770 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 SMTNL2Q2TAL5 461 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 TMCO3Q6UWJ1 677 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 RBM43Q6ZSC3 357 aaKnown RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 RFLNAQ6ZTI6 216 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 USP45Q70EL2 814 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 MARK2Q7KZI7 788 aaKnown RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 TRIM74Q86UV6 250 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 ZNF761Q86XN6 746 aaPredicted RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 FAM129CQ86XR2 697 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 PTRH1Q86Y79 214 aaKnown RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 CACNA2D3Q8IZS8 1091 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 BBS5Q8N3I7 341 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 FNIP1Q8TF40 1166 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 SCRN2Q96FV2 425 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 OR2M4Q96R27 311 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 MCCC1Q96RQ3 725 aaPredicted RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 DDA1Q9BW61 102 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 OCIAD1Q9NX40 245 aa23.86■■□□□ 1.41
USP47-205ENST00000525257 CNOT8Q9UFF9 292 aaKnown RBP23.86■■□□□ 1.41
USP47-205ENST00000525257 MAFKO60675 156 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 PGLSO95336 258 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 SOD1P00441 154 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ARL4AP40617 200 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ARMC12Q5T9G4 340 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 TECPR1Q7Z6L1 1165 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ATPAF2Q8N5M1 289 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 HSPH1Q92598 858 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ZNF653Q96CK0 615 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ADNPQ9H2P0 1102 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 ANO10Q9NW15 660 aa23.85■■□□□ 1.41
USP47-205ENST00000525257 TRBV23OR9-2A0A075B6M9 112 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 LRRC53A6NM62 1247 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 EFCAB7A8K855 629 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 FTLP02792 175 aaPredicted RBP23.84■■□□□ 1.41
USP47-205ENST00000525257 ATP1A3P13637 1013 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 TCF4P15884 667 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 IL1R2P27930 398 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 MMP13P45452 471 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 POLE2P56282 527 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 DPTQ07507 201 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 SQSTM1Q13501 440 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 DPYSL2Q16555 572 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 SASS6Q6UVJ0 657 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 NSMCE1Q8WV22 266 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 AP2M1Q96CW1 435 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 SCARF2Q96GP6 870 aaPredicted RBP23.84■■□□□ 1.41
USP47-205ENST00000525257 SMIM14Q96QK8 99 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 DPYSL5Q9BPU6 564 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 ABCG8Q9H221 673 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 HSD3B7Q9H2F3 369 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 MYO1AQ9UBC5 1043 aa23.84■■□□□ 1.41
USP47-205ENST00000525257 RAD1O60671 282 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 GPLD1P80108 840 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 KCNAB2Q13303 367 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 ASIC2Q16515 512 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 STX1AQ16623 288 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 COLEC12Q5KU26 742 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 DCAF12Q5T6F0 453 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 MARC1Q5VT66 337 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 LRRC66Q68CR7 880 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 ANKS6Q68DC2 871 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 TMEM71Q6P5X7 295 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 ADAMTSL4Q6UY14 1074 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 POLNQ7Z5Q5 900 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 NRSN1Q8IZ57 195 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 SLC37A2Q8TED4 501 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 SCAMP4Q969E2 229 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 AHCYL2Q96HN2 611 aaKnown RBP23.83■■□□□ 1.41
USP47-205ENST00000525257 CSPG4P5Q96PW8 444 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 ASPSCR1Q9BZE9 553 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 HAUS4Q9H6D7 363 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.83■■□□□ 1.41
USP47-205ENST00000525257 MYO6Q9UM54 1294 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 SCINQ9Y6U3 715 aa23.83■■□□□ 1.41
USP47-205ENST00000525257 B4E171 279 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 PDHA1P08559 390 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 TSPAN7P41732 249 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 NCAPHQ15003 741 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 PYCR3Q53H96 274 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 RALGPS1Q5JS13 557 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 SNAP47Q5SQN1 464 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 ZNF571Q7Z3V5 609 aaPredicted RBP23.82■■□□□ 1.4
USP47-205ENST00000525257 GALNT13Q8IUC8 556 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 ZNF564Q8TBZ8 553 aaPredicted RBP23.82■■□□□ 1.4
USP47-205ENST00000525257 PIH1D2Q8WWB5 315 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 SLC38A3Q99624 504 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 NT5MQ9NPB1 228 aa23.82■■□□□ 1.4
USP47-205ENST00000525257 PPIL1Q9Y3C6 166 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms