RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 LPCAT1Q8NF37 534 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 SLC35G2Q8TBE7 412 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 LRRN4Q8WUT4 740 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 PTCD2Q8WV60 388 aaKnown RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 KCNE4Q8WWG9 221 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 AP2M1Q96CW1 435 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 SLC46A1Q96NT5 459 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 OLFM3Q96PB7 478 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 RNF157Q96PX1 679 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 GFM1Q96RP9 751 aaKnown RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 GSDMCQ9BYG8 508 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 CDH19Q9H159 772 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 SUDS3Q9H7L9 328 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 NHEJ1Q9H9Q4 299 aaPredicted RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 RBM22Q9NW64 420 aaKnown RBP eCLIP9.42□□□□□ -0.94e-6■■■■□ 24.3
SF3B2-204ENST00000525207 TRNAU1APQ9NX07 287 aaKnown RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 GOLGA6AQ9NYA3 693 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 APPL1Q9UKG1 709 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 SUFUQ9UMX1 484 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 RPL26L1Q9UNX3 145 aaKnown RBP9.42□□□□□ -0.9
SF3B2-204ENST00000525207 CHKBQ9Y259 395 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 SLC17A4Q9Y2C5 497 aa9.42□□□□□ -0.9
SF3B2-204ENST00000525207 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 BPTFQ12830 3046 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 KCNK1O00180 336 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 APOL1O14791 398 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 NUDT21O43809 227 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 FUCA1P04066 466 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 KRT1P04264 644 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 PYGLP06737 847 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 IVLP07476 585 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 MMP2P08253 660 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 ITGA2BP08514 1039 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 CES1P23141 567 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 RBMS1P29558 406 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 ARHGAP25P42331 645 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 GPR1P46091 355 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 GNPDA1P46926 289 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 INHBCP55103 352 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 MAZP56270 477 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 CCL7P80098 99 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 EIF3IQ13347 325 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 NR1D2Q14995 579 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 LRRC38Q5VT99 294 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 DOK6Q6PKX4 331 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 RFLNAQ6ZTI6 216 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 ZNF438Q7Z4V0 828 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 C17orf82Q86X59 251 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 RAVER1Q8IY67 606 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 CCNYQ8ND76 341 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 SCARF2Q96GP6 870 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 NAF1Q96HR8 494 aaKnown RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 CCDC42Q96M95 316 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 OR2M4Q96R27 311 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 UBL7Q96S82 380 aaPredicted RBP9.41□□□□□ -0.9
SF3B2-204ENST00000525207 MFRPQ9BY79 579 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 FOXP3Q9BZS1 431 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 ABCG8Q9H221 673 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 LRRN3Q9H3W5 708 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 DPEP2Q9H4A9 486 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 PCDH9Q9HC56 1237 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 EPB41L5Q9HCM4 733 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 TAAR2Q9P1P5 351 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 CD84Q9UIB8 345 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 INTUQ9ULD6 942 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 ST14Q9Y5Y6 855 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 RNF215Q9Y6U7 377 aa9.41□□□□□ -0.9
SF3B2-204ENST00000525207 C1orf232A0A0U1RR37 186 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TEX51A0A1B0GUA7 166 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 PLD2O14939 933 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 AK4P27144 223 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-204ENST00000525207 CD86P42081 329 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 UCNP55089 124 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TMPRSS3P57727 454 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 CXADRP78310 365 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 PTSQ03393 145 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TBX2Q13207 712 aaPredicted RBP9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TCEAL1Q15170 157 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 QPCTQ16769 361 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 MAP9Q49MG5 647 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 HENMT1Q5T8I9 393 aaKnown RBP9.4□□□□□ -0.9
SF3B2-204ENST00000525207 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 SLC30A9Q6PML9 568 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 SARM1Q6SZW1 724 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TRIM74Q86UV6 250 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 NLRP8Q86W28 1048 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 SLITRK4Q8IW52 837 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 NRSN1Q8IZ57 195 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 ARL14Q8N4G2 192 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 CNTD1Q8N815 330 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 ZDHHC1Q8WTX9 485 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 PATE1Q8WXA2 126 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 COX14Q96I36 57 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 TMEM74Q96NL1 305 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 AGAP2Q99490 1192 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 STRADBQ9C0K7 418 aa9.4□□□□□ -0.9
SF3B2-204ENST00000525207 SPATS2LQ9NUQ6 558 aaKnown RBP9.4□□□□□ -0.9
SF3B2-204ENST00000525207 LRIT1Q9P2V4 623 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms