RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 RHOCP08134 193 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 MMP2P08253 660 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TROVE2P10155 538 aaKnown RBP eCLIP7.09□□□□□ -1.27
VPS11-201ENST00000524454 CR2P20023 1033 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 BCKDHBP21953 392 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 GRK2P25098 689 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CRABP2P29373 138 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ALDH3A1P30838 453 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TNFRSF4P43489 277 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ARCN1P48444 511 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 SERPINB4P48594 390 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 HK2P52789 917 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 PLK1P53350 603 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 AP1S1P61966 158 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 RPS24P62847 133 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 MRPS21P82921 87 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 SLC20A2Q08357 652 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 SLC10A7Q0GE19 358 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 MSLNQ13421 630 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 SLC1A5Q15758 541 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CERCAMQ5T4B2 595 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TEDDM1Q5T9Z0 273 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TMEM215Q68D42 235 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TTC19Q6DKK2 380 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 KIAA1211LQ6NV74 962 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ARHGAP36Q6ZRI8 547 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 TFAP2DQ7Z6R9 452 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CLEC14AQ86T13 490 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 SRLQ86TD4 932 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CIR1Q86X95 450 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 CACUL1Q86Y37 369 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CHPFQ8IZ52 775 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 PGBD3Q8N328 593 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ZNF366Q8N895 744 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ANKRD42Q8N9B4 389 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 MDGA1Q8NFP4 955 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 IPMKQ8NFU5 416 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 GPR150Q8NGU9 434 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CYB5D2Q8WUJ1 264 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 RLN3Q8WXF3 142 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 SERAC1Q96JX3 654 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 C2orf49Q9BVC5 232 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 FAM126AQ9BYI3 521 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 PITPNM3Q9BZ71 974 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 STN1Q9H668 368 aaKnown RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 POPDC3Q9HBV1 291 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 NT5MQ9NPB1 228 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 PARD6AQ9NPB6 346 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 CD93Q9NPY3 652 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 ABCB8Q9NUT2 735 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 HACD3Q9P035 362 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 KLHL14Q9P2G3 628 aa7.09□□□□□ -1.27
VPS11-201ENST00000524454 UBA2Q9UBT2 640 aaPredicted RBP7.09□□□□□ -1.27
VPS11-201ENST00000524454 CACNA1HO95180 2353 aa7.09□□□□□ -1.28
VPS11-201ENST00000524454 PLXND1Q9Y4D7 1925 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 A0A1W2PQ67 120 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 J3KR12 359 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 SOCS5O75159 536 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 DCTN3O75935 186 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 NDST3O95803 873 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 MT-CYBP00156 380 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 ATXN1LP0C7T5 689 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 HLA-EP13747 358 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 HOXB2P14652 356 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 GABRG2P18507 467 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 OGNP20774 298 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 CD9P21926 228 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 HLA-FP30511 346 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CD70P32970 193 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 SERPINB5P36952 375 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 IL12RB1P42701 662 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 LEPRP48357 1165 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 CORO7P57737 925 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 POU4F1Q01851 419 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 SPEM2Q0P670 501 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 LRRC14Q15048 493 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 ZKSCAN8Q15776 578 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 CRY1Q16526 586 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 SKIDA1Q1XH10 827 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 TSNAXIP1Q2TAA8 658 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 MPPE1Q53F39 396 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 EOGTQ5NDL2 527 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 SYCP2LQ5T4T6 812 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 TSTD2Q5T7W7 516 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 FAM91A1Q658Y4 838 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CXorf57Q6NSI4 855 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 RETSATQ6NUM9 610 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CCDC121Q6ZUS5 278 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 STRA8Q7Z7C7 330 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 ZC3HC1Q86WB0 502 aaKnown RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 NDUFAF2Q8N183 169 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CARNMT1Q8N4J0 409 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 CAMKK1Q8N5S9 505 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 DEFB119Q8N690 84 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 C2CD4AQ8NCU7 369 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 SPATA22Q8NHS9 363 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 BRSK1Q8TDC3 778 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 GAB3Q8WWW8 586 aa7.08□□□□□ -1.28
VPS11-201ENST00000524454 ZNF75CPQ92670 426 aaPredicted RBP7.08□□□□□ -1.28
VPS11-201ENST00000524454 HPS1Q92902 700 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms