RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356		A8MZ25	164 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CTDSP2	O14595	271 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	ASAP2	O43150	1006 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SEPT4	O43236	478 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	EXOC3	O60645	756 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SEC14L2	O76054	403 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	RASAL1	O95294	804 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	LARGE1	O95461	756 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	OLFM2	O95897	454 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	UROD	P06132	367 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CYP2A6	P11509	494 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CDH2	P19022	906 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SAT1	P21673	171 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	NTSR1	P30989	418 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CASQ1	P31415	396 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TTK	P33981	857 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	RFC1	P35251	1148 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	PNPLA4	P41247	253 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SLC15A1	P46059	708 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	GPC3	P51654	580 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	UFM1	P61960	85 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	HMGN5	P82970	282 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CEBPZ	Q03701	1054 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	AIMP2	Q13155	320 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TUBB3	Q13509	450 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CSHL1	Q14406	222 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	NAA25	Q14CX7	972 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	ANKDD1A	Q495B1	522 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SLC9B1	Q4ZJI4	515 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	UTP14C	Q5TAP6	766 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	FAM160B1	Q5W0V3	765 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	KRT80	Q6KB66	452 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	ADGRG6	Q86SQ4	1221 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	MON1A	Q86VX9	555 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	LURAP1L	Q8IV03	231 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TMEM116	Q8NCL8	245 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	RFWD2	Q8NHY2	731 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	MRPS27	Q92552	414 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	ARHGEF2	Q92974	986 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	INTS12	Q96CB8	462 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TRIM44	Q96DX7	344 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	MASTL	Q96GX5	879 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	MOGAT1	Q96PD6	335 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	FIZ1	Q96SL8	496 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	NTPCR	Q9BSD7	190 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TPSD1	Q9BZJ3	242 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	TRIM6	Q9C030	488 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	SLC32A1	Q9H598	525 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	KAT14	Q9H8E8	782 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	POLR1B	Q9H9Y6	1135 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	MID1IP1	Q9NPA3	183 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	NFU1	Q9UMS0	254 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	PTRH2	Q9Y3E5	179 aa	Known RBP	4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	CACNA1S	Q13698	1873 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	FER1L6	Q2WGJ9	1857 aa		4.41	□□□□□ -1.7
PCM1-223	ENST00000524356	COL15A1	P39059	1388 aa		4.4	□□□□□ -1.7
PCM1-223	ENST00000524356	KIAA0100	Q14667	2235 aa	Known RBP	4.4	□□□□□ -1.7
PCM1-223	ENST00000524356	LOC105369274	A0A096LPK9	316 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	LOC102723532	A0A0G2JNH3	316 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	GXYLT2	A0PJZ3	443 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	EME2	A4GXA9	379 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	AGAP5	A6NIR3	686 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356		E7ENX8	843 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	AGPS	O00116	658 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	RNMT	O43148	476 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	PRPSAP2	O60256	369 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	DIAPH2	O60879	1101 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CBFA2T3	O75081	653 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	APBB3	O95704	486 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	KRT13	P13646	458 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	HGF	P14210	728 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	HOXC8	P31273	242 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	HTR7	P34969	479 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	GPD2	P43304	727 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CPA2	P48052	419 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	MRPL12	P52815	198 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	STARD6	P59095	220 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	OLR1	P78380	273 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	TAP2	Q03519	686 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	RNASEL	Q05823	741 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CXCL9	Q07325	125 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	TCF15	Q12870	199 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CRYM	Q14894	314 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	SMU1	Q2TAY7	513 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	AMOT	Q4VCS5	1084 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	ZRANB3	Q5FWF4	1079 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM154	Q6P9G4	183 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	CHST3	Q7LGC8	479 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	PPP1R42	Q7Z4L9	355 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	ZER1	Q7Z7L7	766 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	KBTBD6	Q86V97	674 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	DCP1B	Q8IZD4	617 aa	Known RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	OR4N4	Q8N0Y3	316 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	GPC2	Q8N158	579 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	PTGR2	Q8N8N7	351 aa	Predicted RBP	4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	MIGA1	Q8NAN2	632 aa		4.4	□□□□□ -1.71
PCM1-223	ENST00000524356	ZBTB44	Q8NCP5	570 aa		4.4	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms