RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 C16orf72Q14CZ0 275 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 NFKBIBQ15653 356 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 PHF19Q5T6S3 580 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 LRRC66Q68CR7 880 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 DOK6Q6PKX4 331 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 USP53Q70EK8 1073 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 NAGSQ8N159 534 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 LRRN4Q8WUT4 740 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 USP7Q93009 1102 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 SCAMP4Q969E2 229 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 TMEM159Q96B96 161 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 SCARF2Q96GP6 870 aaPredicted RBP18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 AGAP2Q99490 1192 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 CAPN11Q9UMQ6 739 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 NENFQ9UMX5 172 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 TMEM98Q9Y2Y6 226 aa18.73■□□□□ 0.59
PTP4A3-206ENST00000524028 RHPN2P1A8MT19 583 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 C9orf172C9J069 976 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 MYO1FO00160 1098 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 IVLP07476 585 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 KRT10P13645 584 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 CD1CP29017 333 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 GPR1P46091 355 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 UBASH3AP57075 661 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 DSC2Q02487 901 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 PAFAH1B3Q15102 231 aaKnown RBP18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 MAP9Q49MG5 647 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 CCDC122Q5T0U0 273 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 TRIM74Q86UV6 250 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 PIM3Q86V86 326 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 ZFAND4Q86XD8 727 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 LRRC49Q8IUZ0 686 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 MAML1Q92585 1016 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 CMKLR1Q99788 373 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 NUDT22Q9BRQ3 303 aa18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 POLR1EQ9GZS1 481 aaKnown RBP18.72■□□□□ 0.59
PTP4A3-206ENST00000524028 A0A0J9YYE9 177 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 SYCE3A1L190 88 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 CAPN8A6NHC0 703 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 MATN3O15232 486 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 PPM1DO15297 605 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 CPNE6O95741 557 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 TRBC1P01850 177 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 LIPCP11150 499 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 CCL4P13236 92 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 MAPK10P53779 464 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 ALG1LQ6GMV1 187 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 ADAMTSL4Q6UY14 1074 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 ARRDC2Q8TBH0 407 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 AP2M1Q96CW1 435 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 RBM22Q9NW64 420 aaKnown RBP eCLIP18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
PTP4A3-206ENST00000524028 UNC13CQ8NB66 2214 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 IGHV5-10-1A0A0J9YXX1 117 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 PRLP01236 227 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 GYPCP04921 128 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 GJC1P36383 396 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 TAS2R40P59535 323 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 NIPAL4Q0D2K0 466 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 HADHQ16836 314 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 LINC00303Q3SY05 128 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 PYCR3Q53H96 274 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 ANKRD20A8PQ5CZ79 823 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 NKAIN2Q5VXU1 208 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 KCTD6Q8NC69 237 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 RCBTB1Q8NDN9 531 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 ZNF564Q8TBZ8 553 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 MED8Q96G25 268 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 TDRD1Q9BXT4 1180 aaKnown RBP18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 PCYT1BQ9Y5K3 369 aaPredicted RBP18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 AHCTF1Q8WYP5 2266 aa18.7■□□□□ 0.58
PTP4A3-206ENST00000524028 PIEZO2Q9H5I5 2752 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 CCNCP24863 283 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 ACTR1BP42025 376 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 STC1P52823 247 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 ACTR1AP61163 376 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 GBE1Q04446 702 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 SLC10A2Q12908 348 aaPredicted RBP18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 MARK2Q7KZI7 788 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 VASH2Q86V25 355 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 NLRP8Q86W28 1048 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 DTX1Q86Y01 620 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 NDUFAF2Q8N183 169 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 PQLC3Q8N755 202 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 EXD3Q8N9H8 876 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 COX14Q96I36 57 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 CCDC74BQ96LY2 380 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 TSGA13Q96PP4 275 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 OR2M4Q96R27 311 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 RIOK2Q9BVS4 552 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 LUC7L2Q9Y383 392 aaKnown RBP18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 SCN8AQ9UQD0 1980 aa18.69■□□□□ 0.58
PTP4A3-206ENST00000524028 TENM4Q6N022 2769 aa18.68■□□□□ 0.58
PTP4A3-206ENST00000524028 B8ZZF3 427 aa18.68■□□□□ 0.58
PTP4A3-206ENST00000524028 PROSCO94903 275 aa18.68■□□□□ 0.58
PTP4A3-206ENST00000524028 CLDN7O95471 211 aa18.68■□□□□ 0.58
PTP4A3-206ENST00000524028 HLA-DQB2P05538 268 aa18.68■□□□□ 0.58
PTP4A3-206ENST00000524028 ZNF30P17039 623 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms