RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 EIF2DP41214 584 aaKnown RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 GARSP41250 739 aaKnown RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 RFX5P48382 616 aaPredicted RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 GLUD2P49448 558 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 PCYT1AP49585 367 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 MXI1P50539 228 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 POLGP54098 1239 aaPredicted RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 MRPS34P82930 218 aaKnown RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 FOXM1Q08050 763 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 STK4Q13043 487 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 HLFQ16534 295 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 CTF1Q16619 201 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 PNLIPRP3Q17RR3 467 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 PCGF3Q3KNV8 242 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 ODF3L2Q3SX64 289 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 CDONQ4KMG0 1287 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 RAB41Q5JT25 222 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 DCST1Q5T197 706 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 PDXDC1Q6P996 788 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 ZNF549Q6P9A3 640 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 TMCO3Q6UWJ1 677 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 KRBA2Q6ZNG9 492 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 DPPA4Q7L190 304 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 EPHX4Q8IUS5 362 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 POC5Q8NA72 575 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 MCUQ8NE86 351 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 ASB5Q8WWX0 329 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 VOPP1Q96AW1 172 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 ELMOD3Q96FG2 381 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 OR1F2PQ96R84 312 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 MRPL44Q9H9J2 332 aaKnown RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 C17orf75Q9HAS0 396 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 SUCLA2Q9P2R7 463 aaPredicted RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 COPG2Q9UBF2 871 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 UBA2Q9UBT2 640 aaPredicted RBP3.95□□□□□ -1.78
SKP1-212ENST00000523966 OR14J1Q9UGF5 321 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 FBXW11Q9UKB1 542 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 SNX9Q9Y5X1 595 aa3.95□□□□□ -1.78
SKP1-212ENST00000523966 ARHGEF17Q96PE2 2063 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 COL3A1P02461 1466 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 FAM90A8PA6NJQ4 464 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 AGAP14A8MT82 685 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 HS3ST1O14792 307 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 OGG1O15527 345 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 TMCC2O75069 709 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 BEST1O76090 585 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 EGFP01133 1207 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 IGKV2-30P06310 120 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 FAM90A13PP0C7W8 464 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 FAM90A24PP0C7X0 464 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 GABRB1P18505 474 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 MATR3P43243 847 aaKnown RBP eCLIP3.94□□□□□ -1.786e-8■■■■□ 26.1
SKP1-212ENST00000523966 RRP1P56182 461 aaKnown RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 TAS2R40P59535 323 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 CSNK2A1P68400 391 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 MAD2L1Q13257 205 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 NTRK2Q16620 822 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 EIF2S3LQ2VIR3 472 aaKnown RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 AMZ1Q400G9 498 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 KIAA0930Q6ICG6 404 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 ANKRD54Q6NXT1 300 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 CRELD2Q6UXH1 353 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 ENOSF1Q7L5Y1 443 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 ARID3BQ8IVW6 561 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 FBXL14Q8N1E6 418 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 PRR26Q8N8Z3 221 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 APPL2Q8NEU8 664 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 CSNK2A3Q8NEV1 391 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 DNAAF4Q8WXU2 420 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 WASF1Q92558 559 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 ORAI1Q96D31 301 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 MXD3Q9BW11 206 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 SEZ6LQ9BYH1 1024 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 OSGEPL1Q9H4B0 414 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 ESRP2Q9H6T0 727 aaKnown RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 ACSS1Q9NUB1 689 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 ARHGEF38Q9NXL2 777 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 MRPL15Q9P015 296 aaKnown RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 CHORDC1Q9UHD1 332 aaPredicted RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 AGO1Q9UL18 857 aaKnown RBP3.94□□□□□ -1.78
SKP1-212ENST00000523966 CMAHPQ9Y471 501 aa3.94□□□□□ -1.78
SKP1-212ENST00000523966 KANSL1LA0AUZ9 987 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 LINC01553A4QN01 128 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SYNDIG1LA6NDD5 238 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 A8MV72 311 aaPredicted RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 CDRT15L2A8MXV6 281 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 J3KR12 359 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 OVOL3O00110 214 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 ATP2A1O14983 1001 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 SPINT2O43291 252 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE7O76087 117 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 FTCDO95954 541 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE12FP0CL80 117 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE12GP0CL81 117 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 GAGE12IP0CL82 117 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 ANXA7P20073 488 aaKnown RBP3.93□□□□□ -1.78
SKP1-212ENST00000523966 PON1P27169 355 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 BDKRB2P30411 391 aa3.93□□□□□ -1.78
SKP1-212ENST00000523966 NNMTP40261 264 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms