RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 FHOD1Q9Y613 1164 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 ABCA12Q86UK0 2595 aa11.59□□□□□ -0.55
SDCBP-211ENST00000523441 DOPEY1Q5JWR5 2465 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 DFFAO00273 331 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 INPP4BO15327 924 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 KIAA0754O94854 1291 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 ASMTLO95671 621 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 DLGAP3O95886 979 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 HOXC4P09017 264 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TNFRSF8P28908 595 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 CASP14P31944 242 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 CDH5P33151 784 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 GPR1P46091 355 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 PAPOLAP51003 745 aaKnown RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 YBEYP58557 167 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 POLR2LP62875 67 aaKnown RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 NOMO3P69849 1222 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 GPLD1P80108 840 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 CNGA3Q16281 694 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 PARP15Q460N3 678 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 CPZQ66K79 652 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 C6orf15Q6UXA7 325 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 MAMDC2Q7Z304 686 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 COQ10AQ96MF6 247 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 OR2M4Q96R27 311 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TUBGCP5Q96RT8 1024 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 DPYSL5Q9BPU6 564 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TBC1D10AQ9BXI6 508 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 SP110Q9HB58 689 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 FBXO8Q9NRD0 319 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 LNPEPQ9UIQ6 1025 aa11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TMEM184BQ9Y519 407 aaPredicted RBP11.58□□□□□ -0.56
SDCBP-211ENST00000523441 TCP11X1B4DZS4 312 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 CTPS1P17812 591 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 CCL11P51671 97 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 PGDP52209 483 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 GFERP55789 205 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 TPI1P60174 286 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 SH3BP2P78314 561 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 HHEXQ03014 270 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-211ENST00000523441 AFMIDQ63HM1 303 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 ARHGAP36Q6ZRI8 547 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 RFLNAQ6ZTI6 216 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 Q6ZVL8 140 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 CHST15Q7LFX5 561 aaPredicted RBP11.57□□□□□ -0.56
SDCBP-211ENST00000523441 ARHGAP22Q7Z5H3 698 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 NSMCE3Q96MG7 304 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 OR6C1Q96RD1 312 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 RUFY1Q96T51 708 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 ZPBPQ9BS86 351 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 TEX101Q9BY14 249 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 SLC39A8Q9C0K1 460 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 CATSPERBQ9H7T0 1116 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 PDFQ9HBH1 243 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 TMEM51Q9NW97 253 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 ZNHIT2Q9UHR6 403 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
SDCBP-211ENST00000523441 CFAP69A5D8W1 941 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 C2CD4BA6NLJ0 364 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 PRAMEF11O60813 436 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 RASSF9O75901 435 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 KRT38O76015 456 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 CPP00450 1065 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 PRKCSHP14314 528 aaPredicted RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 TYRP1P17643 537 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 POU3F2P20265 443 aaPredicted RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 GPD1P21695 349 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 VIPR1P32241 457 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 RFC1P35251 1148 aaPredicted RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 PMS2P54278 862 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 RPS18P62269 152 aaKnown RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 PEX6Q13608 980 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 STRADAQ7RTN6 431 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 TSPAN33Q86UF1 283 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 GALNT13Q8IUC8 556 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 TGM7Q96PF1 710 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 SLC25A23Q9BV35 468 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 SELENOOQ9BVL4 669 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 STN1Q9H668 368 aaKnown RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 RETREG1Q9H6L5 497 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 CNOT8Q9UFF9 292 aaKnown RBP11.56□□□□□ -0.56
SDCBP-211ENST00000523441 KCNK6Q9Y257 313 aa11.56□□□□□ -0.56
SDCBP-211ENST00000523441 ARHGAP42A6NI28 874 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 DAPK3O43293 454 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 CCP110O43303 1012 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 KRT86O43790 486 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 GFPT2O94808 682 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 HEXIM1O94992 359 aaKnown RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 NDUFA10O95299 355 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 LSM8O95777 96 aaKnown RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 ATP1A1P05023 1023 aaKnown RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 CCNYL3P0C7X3 344 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 KRT3P12035 628 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 PTPN9P43378 593 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SQSTM1Q13501 440 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 INPP5JQ15735 1006 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms