RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 UNC5BQ8IZJ1 945 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 AADATQ8N5Z0 425 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 PPM1NQ8N819 430 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 PJA1Q8NG27 643 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 GPR150Q8NGU9 434 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 EPS8L3Q8TE67 593 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 HDAC10Q969S8 669 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 EID2BQ96D98 161 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CDKN2AIPNLQ96HQ2 116 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 TBATAQ96M53 351 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 IER2Q9BTL4 223 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 MKRN2Q9H000 416 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CDH19Q9H159 772 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 LMAN1LQ9HAT1 526 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 POLMQ9NP87 494 aaPredicted RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 PPANQ9NQ55 473 aaKnown RBP13.04□□□□□ -0.32
CPNE3-205ENST00000522240 APPL1Q9UKG1 709 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 FZD4Q9ULV1 537 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 FADS3Q9Y5Q0 445 aa13.04□□□□□ -0.32
CPNE3-205ENST00000522240 CCDC162PA2VCL2 907 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 FAM170BA6NMN3 283 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 CXorf49A8MYA2 514 aaPredicted RBP13.03□□□□□ -0.32
CPNE3-205ENST00000522240 POC1B-GALNT4F8VUJ3 575 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 BUD23O43709 281 aaKnown RBP13.03□□□□□ -0.32
CPNE3-205ENST00000522240 GOT2P00505 430 aaKnown RBP13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MYZAPP0CAP1 466 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 FOXN2P32314 431 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 GP5P40197 560 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MSH2P43246 934 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MAGEA9P43362 315 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 RPS9P46781 194 aaKnown RBP13.03□□□□□ -0.32
CPNE3-205ENST00000522240 SERPINB9P50453 376 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 PTSQ03393 145 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 FZD5Q13467 585 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 HSP90AA5PQ58FG0 334 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 TEDDM1Q5T9Z0 273 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MRNIPQ6NTE8 343 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 NEPROQ6NW34 567 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 ADGRD1Q6QNK2 874 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 LIPIQ6XZB0 460 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 TAOK1Q7L7X3 1001 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 TMPRSS6Q8IU80 811 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 HDDC3Q8N4P3 179 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 GOLGA6L1Q8N7Z2 621 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 OR4L1Q8NH43 312 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 DTX3LQ8TDB6 740 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 DCAKDQ8WVC6 231 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 CLDN23Q96B33 292 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 SIPA1Q96FS4 1042 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 PGM2Q96G03 612 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MRGPRX1Q96LB2 322 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 CPNE1Q99829 537 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 FOXQ1Q9C009 403 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 CHRDQ9H2X0 955 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 MED4Q9NPJ6 270 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 IARS2Q9NSE4 1012 aaKnown RBP13.03□□□□□ -0.32
CPNE3-205ENST00000522240 CATSPERZQ9NTU4 200 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 IL1RAPL1Q9NZN1 696 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 TXNDC16Q9P2K2 825 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 FKBPLQ9UIM3 349 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 IKBKGQ9Y6K9 419 aa13.03□□□□□ -0.32
CPNE3-205ENST00000522240 A0A1W2PP55 124 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TCRBV21S2A2A0A5A6 115 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TSPAN6O43657 245 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 BPIP17213 487 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 NDUFV2P19404 249 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 CNTFP26441 200 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 ATP5DP30049 168 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 MC4RP32245 332 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 SPINT3P49223 89 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TMPRSS15P98073 1019 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 XIAPP98170 497 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 CREB5Q02930 508 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 PEX6Q13608 980 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 PTPRCAPQ14761 206 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TYSND1Q2T9J0 566 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 AARS2Q5JTZ9 985 aaKnown RBP13.02□□□□□ -0.33
CPNE3-205ENST00000522240 ZNF470Q6ECI4 717 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 PACS1Q6VY07 963 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 ZNF765Q7L2R6 523 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 CACUL1Q86Y37 369 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 NRSN1Q8IZ57 195 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 C2CD4AQ8NCU7 369 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-205ENST00000522240 OR6P1Q8NGX9 317 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.02□□□□□ -0.333e-6■■■■□ 20.9
CPNE3-205ENST00000522240 OMDQ99983 421 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 STMN4Q9H169 189 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-205ENST00000522240 TMBIM4Q9HC24 238 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 KCTD5Q9NXV2 234 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 ITM2BQ9Y287 266 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 MTF2Q9Y483 593 aaPredicted RBP13.02□□□□□ -0.33
CPNE3-205ENST00000522240 SLC30A1Q9Y6M5 507 aa13.02□□□□□ -0.33
CPNE3-205ENST00000522240 GLYATL1P3A0A0U1RQE8 302 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 A0A0U1RQS6 177 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 IQANK1A0A1B0GTG1 560 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 OR51F1A6NGY5 319 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
CPNE3-205ENST00000522240 PLK4O00444 970 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms