RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GKP32189 559 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 RIPK1Q13546 671 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 UBAP2LQ14157 1087 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 AARS2Q5JTZ9 985 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLC22A9Q8IVM8 553 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 RYBPQ8N488 228 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 CNDP1Q96KN2 507 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 BTBD10Q9BSF8 475 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 BBS2Q9BXC9 721 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 TAS2R13Q9NYV9 303 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 HS3ST2Q9Y278 367 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 FNDC3AQ9Y2H6 1198 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 A0A0J9YYE9 177 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 PRR5-ARHGAP8B1AHC4 643 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 F8W8V4 182 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLCO1B7G3V0H7 640 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 HDAC3O15379 428 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZBTB14O43829 449 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 TRBC1P01850 177 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 ENO1P06733 434 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 MAGEA10P43363 369 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 STK19P49842 368 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SNRPD1P62314 119 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 ARHGAP8P85298 464 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 XIAPP98170 497 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SHHQ15465 462 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF77Q15935 545 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SEL1L3Q68CR1 1132 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 GRASPQ7Z6J2 395 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 LONP2Q86WA8 852 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 PAF1Q8N7H5 531 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 MAPK15Q8TD08 544 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 IRF7Q92985 503 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 EID2BQ96D98 161 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 SYTL2Q9HCH5 934 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 CYP4F12Q9HCS2 524 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 TBC1D14Q9P2M4 693 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 TAGLN3Q9UI15 199 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZDHHC2Q9UIJ5 367 aa18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 HELZP42694 1942 aaKnown RBP18.42■□□□□ 0.54
TRAPPC9-210ENST00000521667 AOC1P19801 751 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 SERPINA4P29622 427 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 PTPRNQ16849 979 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLC9B1Q4ZJI4 515 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 ASTLQ6HA08 431 aaPredicted RBP18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 ISG20Q96AZ6 181 aaKnown RBP18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 PTERQ96BW5 349 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 BIRC8Q96P09 236 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 MIPEPQ99797 713 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 SPHK2Q9NRA0 654 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZDHHC7Q9NXF8 308 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 VTI1BQ9UEU0 232 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 MED16Q9Y2X0 877 aa18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 MTCL1Q9Y4B5 1905 aaKnown RBP18.41■□□□□ 0.54
TRAPPC9-210ENST00000521667 PER2O15055 1255 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ATP6V1G2O95670 118 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 CA3P07451 260 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 KCNC1P48547 511 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 CACNG1Q06432 222 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SNCBQ16143 134 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF697Q5TEC3 545 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 C22orf39Q6P5X5 142 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 RINLQ6ZS11 566 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZNF557Q8N988 423 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 FAM136AQ96C01 138 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ABHD8Q96I13 439 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SHCBP1LQ9BZQ2 653 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 LINC00597Q9H2U6 94 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZMYM5Q9UJ78 669 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLC25A13Q9UJS0 675 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 FAM50BQ9Y247 325 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SLC30A1Q9Y6M5 507 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 CCDC85CA6NKD9 419 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 GYG2O15488 501 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 GRID2O43424 1007 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 PABPC1P11940 636 aaKnown RBP18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 PKMP14618 531 aaKnown RBP18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SETMARQ53H47 684 aaPredicted RBP18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 TAS2R42Q7RTR8 314 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZSWIM3Q96MP5 696 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 C19orf43Q9BQ61 176 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 ZFYVE1Q9HBF4 777 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 DPP7Q9UHL4 492 aa18.4■□□□□ 0.54
TRAPPC9-210ENST00000521667 C1orf232A0A0U1RR37 186 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 CAPN8A6NHC0 703 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 ZNF197O14709 1029 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 OR1I1O60431 355 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 PYGLP06737 847 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 BMP1P13497 986 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 TYRP14679 529 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 TCF3P15923 654 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 HNF1BP35680 557 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 NFKB2Q00653 900 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 MYLK3Q32MK0 819 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 COL13A1Q5TAT6 717 aaPredicted RBP18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 METTL21CQ5VZV1 264 aa18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 PDE12Q6L8Q7 609 aaKnown RBP18.39■□□□□ 0.53
TRAPPC9-210ENST00000521667 PAQR3Q6TCH7 311 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms