RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 DNAJC14Q6Y2X3 702 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 CENPLQ8N0S6 344 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 SMIM14Q96QK8 99 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 THUMPD3Q9BV44 507 aaKnown RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 POLR3BQ9NW08 1133 aaPredicted RBP10.14□□□□□ -0.79
MCF2-209ENST00000520602 BAG5Q9UL15 447 aa10.14□□□□□ -0.79
MCF2-209ENST00000520602 PIK3CGP48736 1102 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 SLC7A2P52569 658 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 NRF1Q16656 503 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.13□□□□□ -0.79
MCF2-209ENST00000520602 ATP6AP1LQ52LC2 224 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PITRM1Q5JRX3 1037 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 LRRC73Q5JTD7 316 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 LIMS2Q7Z4I7 341 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 MILR1Q7Z6M3 343 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 NAT16Q8N8M0 369 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 CATSPER1Q8NEC5 780 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 C2orf15Q8WU43 125 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 MTFMTQ96DP5 389 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZNF570Q96NI8 536 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 TRMOQ9BU70 441 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ACTR8Q9H981 624 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PKD2L2Q9NZM6 624 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 FNIP2Q9P278 1114 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 GIMAP2Q9UG22 337 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 SLC25A13Q9UJS0 675 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 COPG1Q9Y678 874 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZNF840PA6NDX5 716 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 IQCF5A8MTL0 148 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 RAD51BO15315 384 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 NPHS1O60500 1241 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 EEF1B2P24534 225 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 CST5P28325 142 aaPredicted RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 CSKP41240 450 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ST8SIA6P61647 398 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 TRIM60Q495X7 471 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZNF697Q5TEC3 545 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PAOXQ6QHF9 649 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 DHFR2Q86XF0 187 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZNF276Q8N554 614 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PPP2R3CQ969Q6 453 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 MYO19Q96H55 970 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ECSITQ9BQ95 431 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 CCDC28BQ9BUN5 200 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZFYVE1Q9HBF4 777 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 EGFL7Q9UHF1 273 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ZNHIT2Q9UHR6 403 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ARIH1Q9Y4X5 557 aaPredicted RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 TRAV19A0A0A6YYK7 116 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PRMT5O14744 637 aaPredicted RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 INPP4BO15327 924 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 MAP4P27816 1152 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 GKP32189 559 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 CDKN2DP55273 166 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ATP6V0D1P61421 351 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 PLOD1Q02809 727 aaPredicted RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 VPS26BQ4G0F5 336 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 SYTL3Q4VX76 610 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ARHGAP15Q53QZ3 475 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 OR9I1Q8NGQ6 314 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 TWIST2Q8WVJ9 160 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ANKRD49Q8WVL7 239 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 IGSF21Q96ID5 467 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 ASB2Q96Q27 587 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 FBRSL1Q9HCM7 1045 aaKnown RBP10.13□□□□□ -0.79
MCF2-209ENST00000520602 APPL1Q9UKG1 709 aa10.13□□□□□ -0.79
MCF2-209ENST00000520602 A0A1W2PRU2 124 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 ILVBLA1L0T0 632 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 SAC3D1A6NKF1 404 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CFAP99D6REC4 459 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CCL16O15467 120 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 NRP2O60462 931 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 S1PR4O95977 384 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 UGT1A6P19224 532 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 UGT1A1P22309 533 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 UGT1A4P22310 534 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 PAX7P23759 505 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 MZF1P28698 734 aaPredicted RBP10.12□□□□□ -0.79
MCF2-209ENST00000520602 UGT1A3P35503 534 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 UGT1A5P35504 534 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 HK2P52789 917 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CLCQ05315 142 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 RING1Q06587 406 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CAPRIN1Q14444 709 aaKnown RBP10.12□□□□□ -0.79
MCF2-209ENST00000520602 PPP1R3AQ16821 1122 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CTC1Q2NKJ3 1217 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 THEMIS2Q5TEJ8 643 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 IRGCQ6NXR0 463 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 KDELC1Q6UW63 502 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 STK40Q8N2I9 435 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 PLD4Q96BZ4 506 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 SEPHS2Q99611 448 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 C17orf80Q9BSJ5 609 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 TMEM106CQ9BVX2 250 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 ATP13A3Q9H7F0 1226 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 ASAH2Q9NR71 780 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 A0A0J9YYE9 177 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 CAPN8A6NHC0 703 aa10.12□□□□□ -0.79
MCF2-209ENST00000520602 LRRC14BA6NHZ5 514 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms