RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 RUVBL2Q9Y230 463 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-223ENST00000520520 GIT1Q9Y2X7 761 aa8.65□□□□□ -1.02
CTNNA1-223ENST00000520520 MTF2Q9Y483 593 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-223ENST00000520520 NME7Q9Y5B8 376 aa8.65□□□□□ -1.02
CTNNA1-223ENST00000520520 TSC2P49815 1807 aa8.65□□□□□ -1.02
CTNNA1-223ENST00000520520 FAM186AA6NE01 2351 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CFLARO15519 480 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ADAM12O43184 909 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 GRID2O43424 1007 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 LAMTOR5O43504 91 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 DNAJA2O60884 412 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 SMIM18P0DKX4 95 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FCGR1AP12314 374 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 NCAM1P13591 858 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TFEBP19484 476 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TKTP29401 623 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC26A3P40879 764 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CXCR3P49682 368 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CSRP3P50461 194 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ERFP50548 548 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 NAGLUP54802 743 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 PSME3P61289 254 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ESRRGP62508 458 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CREB5Q02930 508 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CSTF1Q05048 431 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 NSUN2Q08J23 767 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 GALNT1Q10472 559 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 INPP5AQ14642 412 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 KRT80Q6KB66 452 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FAM45BPQ6NSW5 357 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TSSK4Q6SA08 328 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CES3Q6UWW8 571 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 NAPRTQ6XQN6 538 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CLEC20AQ6ZU45 233 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 GALNT7Q86SF2 657 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC41A1Q8IVJ1 513 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 RNF168Q8IYW5 571 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 SCML4Q8N228 414 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 B4GALNT2Q8NHY0 566 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ITFG1Q8TB96 612 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FAM81AQ8TBF8 368 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FAM45AQ8TCE6 357 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 HM13Q8TCT9 377 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 KCTD4Q8WVF5 259 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FGF13Q92913 245 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 RNF34Q969K3 372 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ROPN1LQ96C74 230 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 DUS3LQ96G46 650 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MPP4Q96JB8 637 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ELMO2Q96JJ3 720 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MAELQ96JY0 434 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CNBD2Q96M20 576 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 AGAP2Q99490 1192 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TTPALQ9BTX7 342 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MLPHQ9BV36 600 aaPredicted RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 FSD1LQ9BXM9 530 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MAGEB5Q9BZ81 275 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 OSBPL2Q9H1P3 480 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CXCL16Q9H2A7 254 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MUC13Q9H3R2 512 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 WDCPQ9H6R7 721 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CAB39LQ9H9S4 337 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 PFDN4Q9NQP4 134 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 PNPLA3Q9NST1 481 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 PIH1D1Q9NWS0 290 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 ADA2Q9NZK5 511 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CDH9Q9ULB4 789 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 CDH7Q9ULB5 785 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 TCAF1Q9Y4C2 921 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 COPG1Q9Y678 874 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 DOCK8Q8NF50 2099 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MIA3Q5JRA6 1907 aa8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 MTCL1Q9Y4B5 1905 aaKnown RBP8.64□□□□□ -1.03
CTNNA1-223ENST00000520520 RIF1Q5UIP0 2472 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 DOCK6Q96HP0 2047 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 E2F8A0AVK6 867 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 ANHXE9PGG2 379 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 PHGDHO43175 533 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 CACNG3O60359 315 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 USP12O75317 370 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 GPC4O75487 556 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 ZMPSTE24O75844 475 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 JCHAINP01591 159 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 CAPNS1P04632 268 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 CHRNGP07510 517 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 SNRPB2P08579 225 aaKnown RBP8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC35E2BP0CK96 405 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 CPB1P15086 417 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 XRCC1P18887 633 aaPredicted RBP8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 SAT1P21673 171 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 LMO2P25791 158 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 NMBRP28336 390 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 EPHA3P29320 983 aa8.63□□□□□ -1.03
CTNNA1-223ENST00000520520 ARRB2P32121 409 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms