RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 FBXO36Q8NEA4 188 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 ST13P5Q8NFI4 369 aaPredicted RBP7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 IPMKQ8NFU5 416 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 DNAJB8Q8NHS0 232 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 GATAD2BQ8WXI9 593 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 UBE2FQ969M7 185 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 ARL8AQ96BM9 186 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 LRRC39Q96DD0 335 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 KIRREL1Q96J84 757 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 ZFYVE19Q96K21 471 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 PPP1R2P1Q96PQ5 205 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 EBNA1BP2Q99848 306 aaKnown RBP7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 SEMA3CQ99985 751 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 TBL1YQ9BQ87 522 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 APOL2Q9BQE5 337 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 FICDQ9BVA6 458 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 SLC2A11Q9BYW1 496 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 ZFP14Q9HCL3 533 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 VPS45Q9NRW7 570 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 ABCB8Q9NUT2 735 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 PIH1D1Q9NWS0 290 aaKnown RBP7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 SYBUQ9NX95 663 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 CLDND1Q9NY35 253 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 LHX3Q9UBR4 397 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 CHMP2BQ9UQN3 213 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 RRP15Q9Y3B9 282 aaKnown RBP7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 TTLL3Q9Y4R7 772 aa7.92□□□□□ -1.14
CTHRC1-203ENST00000520337 SCN8AQ9UQD0 1980 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 F5P12259 2224 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 A0A087WUV0 522 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 LOC285095A0A1B0GVY8 99 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 GOLGA6CA6NDK9 693 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ZNF503-AS2A6NEH8 195 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 K7ERQ8 282 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TRIM24O15164 1050 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 HOXC11O43248 304 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 SMAD6O43541 496 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 SHOX2O60902 331 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ZNF821O75541 412 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NEBLO76041 1014 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TMCC1O94876 653 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 GOLGA6DP0CG33 693 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 PABPC1P11940 636 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TPH1P17752 444 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 GCAP28676 217 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 MTHFRP42898 656 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NPY2RP49146 381 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 EIF3BP55884 814 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 SESN2P58004 480 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NSUN2Q08J23 767 aaKnown RBP eCLIP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 FCHO2Q0JRZ9 810 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 CAMK2GQ13555 558 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 DMC1Q14565 340 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ZNF235Q14590 738 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TMEM215Q68D42 235 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NAPEPLDQ6IQ20 393 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 UNC5AQ6ZN44 842 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 LINC00523Q86TU6 105 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 CCDC117Q8IWD4 279 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 MFSD6LQ8IWD5 586 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 PALM2Q8IXS6 379 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ATP11CQ8NB49 1132 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 SMRP1Q8NCR6 262 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 CYB5D2Q8WUJ1 264 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 PPM1EQ8WY54 764 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 SUSD6Q92537 303 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 VOPP1Q96AW1 172 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 STAMBPL1Q96FJ0 436 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 RIPOR3Q96MK2 946 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ALPK1Q96QP1 1244 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NUDCD1Q96RS6 583 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TRIB3Q96RU7 358 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 RPP25Q9BUL9 199 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 RSRP1Q9BUV0 290 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 CINPQ9BW66 212 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ROPN1BQ9BZX4 212 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 POLR1EQ9GZS1 481 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TRIT1Q9H3H1 467 aaKnown RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 EBF3Q9H4W6 596 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 POMKQ9H5K3 350 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ROPN1Q9HAT0 212 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 ARNT2Q9HBZ2 717 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 TMBIM4Q9HC24 238 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 NOD2Q9HC29 1040 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 HPS4Q9NQG7 708 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 GOLGA6AQ9NYA3 693 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 EURLQ9NYK6 297 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 GGA2Q9UJY4 613 aa7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 MUC22E2RYF6 1773 aaPredicted RBP7.91□□□□□ -1.14
CTHRC1-203ENST00000520337 LRRK1Q38SD2 2015 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 COL4A2P08572 1712 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 TCRBV9S1A1TA0A576 114 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 FAM221AA4D161 298 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 AP3B1O00203 1094 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 INSIG1O15503 277 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 ALDH1A2O94788 518 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 CPP00450 1065 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 PRLP01236 227 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 EPOP01588 193 aa7.9□□□□□ -1.14
CTHRC1-203ENST00000520337 GSTA2P09210 222 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms