RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SLC10A2Q12908 348 aaPredicted RBP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 NR1D2Q14995 579 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 PDK2Q15119 407 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 IFI16Q16666 785 aaKnown RBP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 LRRC66Q68CR7 880 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 RAET1GQ6H3X3 334 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 ADAMTSL4Q6UY14 1074 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 ZNF574Q6ZN55 896 aaPredicted RBP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 PQLC3Q8N755 202 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 ARRDC2Q8TBH0 407 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 KIAA1524Q8TCG1 905 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 SCAMP4Q969E2 229 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 FAF2Q96CS3 445 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 AGAP2Q99490 1192 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 POLR1EQ9GZS1 481 aaKnown RBP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 SEMA6CQ9H3T2 930 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 SUDS3Q9H7L9 328 aaPredicted RBP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 RBM22Q9NW64 420 aaKnown RBP eCLIP12.4□□□□□ -0.42
CSMD1-205ENST00000519623 PISDQ9UG56 409 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 CD84Q9UIB8 345 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 TMEM98Q9Y2Y6 226 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 PLEKHM1Q9Y4G2 1056 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 LOXL2Q9Y4K0 774 aa12.4□□□□□ -0.42
CSMD1-205ENST00000519623 GOLGA6CA6NDK9 693 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 GOLGA6BA6NDN3 693 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 PPM1DO15297 605 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ECEL1O95672 775 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 GOLGA6DP0CG33 693 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 KRT10P13645 584 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ZNF30P17039 623 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ITIH1P19827 911 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 CD1CP29017 333 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ETV5P41161 510 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 GPR1P46091 355 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 STC1P52823 247 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 TGIF1Q15583 401 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ASTE1Q2TB18 679 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-205ENST00000519623 TAF1BQ53T94 588 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-205ENST00000519623 TIGD7Q6NT04 549 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-205ENST00000519623 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 CCDC81Q6ZN84 652 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 USP53Q70EK8 1073 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ZNF765Q7L2R6 523 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 JAMLQ86YT9 394 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 NAGSQ8N159 534 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 NDUFAF2Q8N183 169 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.39□□□□□ -0.43
CSMD1-205ENST00000519623 PATE1Q8WXA2 126 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 TMEM159Q96B96 161 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 AP2M1Q96CW1 435 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 CCNL2Q96S94 520 aaPredicted RBP12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ZNF670Q9BS34 389 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 PACSIN1Q9BY11 444 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 RDH14Q9HBH5 336 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 GOLGA6AQ9NYA3 693 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 CTTNBP2NLQ9P2B4 639 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 UVRAGQ9P2Y5 699 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 AMACRQ9UHK6 382 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 CHKBQ9Y259 395 aa12.39□□□□□ -0.43
CSMD1-205ENST00000519623 ZFC3H1O60293 1989 aaKnown RBP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 RHPN2P1A8MT19 583 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 GOLGA6L19H0YKK7 550 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 AGRPO00253 132 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 CLDN7O95471 211 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 CPNE6O95741 557 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 JMJD7P0C870 316 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 ALDH4A1P30038 563 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 GJC1P36383 396 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 GPR3P46089 330 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 GBE1Q04446 702 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 SQSTM1Q13501 440 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 LY6DQ14210 128 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 C16orf72Q14CZ0 275 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 AMZ1Q400G9 498 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 PYCR3Q53H96 274 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 KIAA1614Q5VZ46 1190 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 DOK6Q6PKX4 331 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 PIM3Q86V86 326 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 MAP7D3Q8IWC1 876 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 NRSN1Q8IZ57 195 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 RAPGEF5Q92565 580 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 USP7Q93009 1102 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 COX14Q96I36 57 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 WDR24Q96S15 920 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 LYSMD1Q96S90 227 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 CMKLR1Q99788 373 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 NUDT22Q9BRQ3 303 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 RIOK2Q9BVS4 552 aaKnown RBP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 TDRD1Q9BXT4 1180 aaKnown RBP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 SEMA4CQ9C0C4 833 aa12.38□□□□□ -0.43
CSMD1-205ENST00000519623 XPO4Q9C0E2 1151 aaKnown RBP12.38□□□□□ -0.43
CSMD1-205ENST00000519623 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms