RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 MLLT6P55198 1093 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 SLC36A3Q495N2 470 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 FBXO48Q5FWF7 155 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 KANK2Q63ZY3 851 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 DHRS4L2Q6PKH6 230 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 GPR141Q7Z602 305 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 GABPB2Q8TAK5 448 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 LRRC58Q96CX6 371 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 MYRFLQ96LU7 910 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 RNF181Q9P0P0 153 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 ACTR3BQ9P1U1 418 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 UXTQ9UBK9 157 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 POLG2Q9UHN1 485 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 ANKRD36A6QL64 1941 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 A0A087WXM4 84 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 TRIM64A6NGJ6 449 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 F8W810 466 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 CNTN5O94779 1100 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 ATXN1LP0C7T5 689 aaKnown RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZNF865P0CJ78 1059 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 HGFP14210 728 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 FASP25445 335 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 PSMA4P25789 261 aaKnown RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 SOX11P35716 441 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 DIO3P55073 304 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 TMED1Q13445 227 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 INPP5AQ14642 412 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 ATP6AP1Q15904 470 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 MARC1Q5VT66 337 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 DUS1LQ6P1R4 473 aaKnown RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 GPR180Q86V85 440 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 PGBD5Q8N414 524 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 PSMG2Q969U7 264 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 C12orf43Q96C57 262 aaKnown RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 FEM1CQ96JP0 617 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 TEX37Q96LM6 180 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 TRIM62Q9BVG3 475 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 AGO3Q9H9G7 860 aaKnown RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 SDR39U1Q9NRG7 319 aaPredicted RBP16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 PCDHA9Q9Y5H5 950 aa16.53■□□□□ 0.24
PCDHGA11-202ENST00000518882 RNF103-CHMP3A0A140T963 221 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 A0A1W2PQH9 124 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 GOT2P00505 430 aaKnown RBP16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ITGB1P05556 798 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 CTSHP09668 335 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZNF37AP17032 561 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 HOXC8P31273 242 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 RPL9P32969 192 aaKnown RBP16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ENTPD1P49961 510 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ECT2LQ008S8 904 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ZBED5Q49AG3 693 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ALFQ53S48 1182 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 RABL3Q5HYI8 236 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 PRMT9Q6P2P2 845 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 LRRC49Q8IUZ0 686 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ADAMTS16Q8TE57 1224 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ABTB1Q969K4 478 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 TUBGCP3Q96CW5 907 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 DCUN1D5Q9BTE7 237 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 TRIM15Q9C019 465 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 TUBA8Q9NY65 449 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ARL5AQ9Y689 179 aa16.52■□□□□ 0.24
PCDHGA11-202ENST00000518882 ASPDHA6ND91 283 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 WASH4PA8MWX3 477 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 SLC2A3P11169 496 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 GFAPP14136 432 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 IL10P22301 178 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 MRPS6P82932 125 aaKnown RBP16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 BNIP2Q12982 314 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 BLOC1S3Q6QNY0 202 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 METTL23Q86XA0 190 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 ZNF683Q8IZ20 524 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 OFCC1Q8IZS5 231 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 UMODL1-AS1Q8N2C9 162 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 ARRDC2Q8TBH0 407 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 CYGBQ8WWM9 190 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 VPS33AQ96AX1 596 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 CENPNQ96H22 339 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 ATOH8Q96SQ7 321 aa16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 NPLQ9BXD5 320 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA11-202ENST00000518882 EI24O14681 340 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 FOXD2O60548 495 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 MATN4O95460 622 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 CYP11A1P05108 521 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 PRSS56P0CW18 603 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 NCK1P16333 377 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 GRIK1P39086 918 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 CACNB2Q08289 660 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 ELMSAN1Q6PJG2 1045 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 SPRED1Q7Z699 444 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 IFNEQ86WN2 208 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 DNAJB14Q8TBM8 379 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 TMEM125Q96AQ2 219 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 C9orf16Q9BUW7 83 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 SOX17Q9H6I2 414 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 PTBP2Q9UKA9 531 aaKnown RBP16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 IKZF3Q9UKT9 509 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 SLC45A1Q9Y2W3 748 aa16.51■□□□□ 0.23
PCDHGA11-202ENST00000518882 INPP4BO15327 924 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms